Protein–RNA interactions for Protein: O94788

ALDH1A2, Retinal dehydrogenase 2, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A2O94788 AL023875.1-201ENST00000640777 796 ntBASIC20.58■□□□□ 0.89
ALDH1A2O94788 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
ALDH1A2O94788 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ALDH1A2O94788 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ALDH1A2O94788 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
ALDH1A2O94788 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ALDH1A2O94788 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
ALDH1A2O94788 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.58■□□□□ 0.88
ALDH1A2O94788 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ALDH1A2O94788 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A2O94788 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.57■□□□□ 0.88
ALDH1A2O94788 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.57■□□□□ 0.88
ALDH1A2O94788 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.57■□□□□ 0.88
ALDH1A2O94788 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A2O94788 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A2O94788 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.57■□□□□ 0.88
ALDH1A2O94788 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A2O94788 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A2O94788 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ALDH1A2O94788 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.57■□□□□ 0.88
ALDH1A2O94788 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A2O94788 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A2O94788 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.57■□□□□ 0.88
ALDH1A2O94788 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.57■□□□□ 0.88
ALDH1A2O94788 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.57■□□□□ 0.88
ALDH1A2O94788 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.57■□□□□ 0.88
ALDH1A2O94788 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.57■□□□□ 0.88
ALDH1A2O94788 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.57■□□□□ 0.88
ALDH1A2O94788 AC124016.1-201ENST00000609552 612 ntBASIC20.57■□□□□ 0.88
ALDH1A2O94788 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.57■□□□□ 0.88
ALDH1A2O94788 AC112907.3-201ENST00000577781 2400 ntBASIC20.57■□□□□ 0.88
ALDH1A2O94788 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A2O94788 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A2O94788 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A2O94788 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALDH1A2O94788 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.57■□□□□ 0.88
ALDH1A2O94788 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.56■□□□□ 0.88
ALDH1A2O94788 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A2O94788 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ALDH1A2O94788 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A2O94788 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A2O94788 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A2O94788 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
ALDH1A2O94788 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A2O94788 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.56■□□□□ 0.88
ALDH1A2O94788 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
ALDH1A2O94788 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.56■□□□□ 0.88
ALDH1A2O94788 LINC01023-201ENST00000606054 436 ntBASIC20.56■□□□□ 0.88
ALDH1A2O94788 AC110285.5-201ENST00000611501 352 ntBASIC20.56■□□□□ 0.88
ALDH1A2O94788 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.56■□□□□ 0.88
ALDH1A2O94788 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A2O94788 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALDH1A2O94788 AFG3L1P-217ENST00000557444 2447 ntBASIC20.56■□□□□ 0.88
ALDH1A2O94788 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A2O94788 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A2O94788 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.55■□□□□ 0.88
ALDH1A2O94788 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ALDH1A2O94788 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A2O94788 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A2O94788 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A2O94788 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A2O94788 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A2O94788 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ALDH1A2O94788 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A2O94788 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.55■□□□□ 0.88
ALDH1A2O94788 AC211429.1-201ENST00000415277 523 ntBASIC20.55■□□□□ 0.88
ALDH1A2O94788 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ALDH1A2O94788 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.55■□□□□ 0.88
ALDH1A2O94788 AL356652.1-201ENST00000615962 565 ntBASIC20.55■□□□□ 0.88
ALDH1A2O94788 AC006557.6-201ENST00000623071 864 ntBASIC20.55■□□□□ 0.88
ALDH1A2O94788 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.55■□□□□ 0.88
ALDH1A2O94788 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A2O94788 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A2O94788 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALDH1A2O94788 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.55■□□□□ 0.88
ALDH1A2O94788 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.55■□□□□ 0.88
ALDH1A2O94788 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.55■□□□□ 0.88
ALDH1A2O94788 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.55■□□□□ 0.88
ALDH1A2O94788 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A2O94788 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A2O94788 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A2O94788 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ALDH1A2O94788 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ALDH1A2O94788 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.54■□□□□ 0.88
ALDH1A2O94788 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A2O94788 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
ALDH1A2O94788 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A2O94788 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.54■□□□□ 0.88
ALDH1A2O94788 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
ALDH1A2O94788 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.54■□□□□ 0.88
ALDH1A2O94788 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ALDH1A2O94788 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A2O94788 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A2O94788 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A2O94788 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ALDH1A2O94788 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A2O94788 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A2O94788 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.54■□□□□ 0.88
ALDH1A2O94788 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALDH1A2O94788 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms