Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
SH2D1AO60880 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
SH2D1AO60880 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SH2D1AO60880 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SH2D1AO60880 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SH2D1AO60880 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SH2D1AO60880 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.8□□□□□ -0.04
SH2D1AO60880 PGM5P4-201ENST00000421970 445 ntBASIC14.8□□□□□ -0.04
SH2D1AO60880 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SH2D1AO60880 CDV3P1-201ENST00000471403 739 ntBASIC14.8□□□□□ -0.04
SH2D1AO60880 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.8□□□□□ -0.04
SH2D1AO60880 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.8□□□□□ -0.04
SH2D1AO60880 KRT18P20-201ENST00000548986 1279 ntBASIC14.8□□□□□ -0.04
SH2D1AO60880 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.8□□□□□ -0.04
SH2D1AO60880 AC131212.1-201ENST00000613771 668 ntBASIC14.8□□□□□ -0.04
SH2D1AO60880 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.8□□□□□ -0.04
SH2D1AO60880 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SH2D1AO60880 AC008406.3-201ENST00000620001 1374 ntBASIC14.8□□□□□ -0.04
SH2D1AO60880 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SH2D1AO60880 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SH2D1AO60880 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SH2D1AO60880 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SH2D1AO60880 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.8□□□□□ -0.04
SH2D1AO60880 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SH2D1AO60880 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.8□□□□□ -0.04
SH2D1AO60880 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SH2D1AO60880 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SH2D1AO60880 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SH2D1AO60880 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SH2D1AO60880 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SH2D1AO60880 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SH2D1AO60880 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SH2D1AO60880 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SH2D1AO60880 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SH2D1AO60880 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SH2D1AO60880 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SH2D1AO60880 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SH2D1AO60880 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SH2D1AO60880 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SH2D1AO60880 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SH2D1AO60880 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SH2D1AO60880 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SH2D1AO60880 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SH2D1AO60880 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.79□□□□□ -0.04
SH2D1AO60880 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SH2D1AO60880 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.79□□□□□ -0.04
SH2D1AO60880 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SH2D1AO60880 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.79□□□□□ -0.04
SH2D1AO60880 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.79□□□□□ -0.04
SH2D1AO60880 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.79□□□□□ -0.04
SH2D1AO60880 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.79□□□□□ -0.04
SH2D1AO60880 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.79□□□□□ -0.04
SH2D1AO60880 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SH2D1AO60880 AL356652.1-201ENST00000615962 565 ntBASIC14.79□□□□□ -0.04
SH2D1AO60880 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SH2D1AO60880 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SH2D1AO60880 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SH2D1AO60880 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.78□□□□□ -0.04
SH2D1AO60880 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SH2D1AO60880 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SH2D1AO60880 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SH2D1AO60880 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SH2D1AO60880 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.78□□□□□ -0.04
SH2D1AO60880 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SH2D1AO60880 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.78□□□□□ -0.04
SH2D1AO60880 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.78□□□□□ -0.04
SH2D1AO60880 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
SH2D1AO60880 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SH2D1AO60880 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SH2D1AO60880 AC097381.1-201ENST00000429019 1296 ntBASIC14.78□□□□□ -0.04
SH2D1AO60880 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.78□□□□□ -0.04
SH2D1AO60880 AL031432.3-201ENST00000607698 485 ntBASIC14.78□□□□□ -0.04
SH2D1AO60880 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.78□□□□□ -0.04
SH2D1AO60880 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SH2D1AO60880 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SH2D1AO60880 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SH2D1AO60880 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.78□□□□□ -0.04
SH2D1AO60880 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SH2D1AO60880 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SH2D1AO60880 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SH2D1AO60880 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SH2D1AO60880 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.78□□□□□ -0.04
SH2D1AO60880 LINC01465-201ENST00000408887 1940 ntBASIC14.78□□□□□ -0.04
SH2D1AO60880 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SH2D1AO60880 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SH2D1AO60880 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SH2D1AO60880 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SH2D1AO60880 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SH2D1AO60880 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.77□□□□□ -0.04
SH2D1AO60880 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SH2D1AO60880 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SH2D1AO60880 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SH2D1AO60880 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SH2D1AO60880 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
SH2D1AO60880 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.77□□□□□ -0.04
SH2D1AO60880 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SH2D1AO60880 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.77□□□□□ -0.05
SH2D1AO60880 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SH2D1AO60880 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SH2D1AO60880 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms