Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZIC3O60481 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ZIC3O60481 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZIC3O60481 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZIC3O60481 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZIC3O60481 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZIC3O60481 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZIC3O60481 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.86■□□□□ 0.45
ZIC3O60481 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZIC3O60481 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.86■□□□□ 0.45
ZIC3O60481 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZIC3O60481 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ZIC3O60481 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.86■□□□□ 0.45
ZIC3O60481 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZIC3O60481 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.86■□□□□ 0.45
ZIC3O60481 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.86■□□□□ 0.45
ZIC3O60481 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ZIC3O60481 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.86■□□□□ 0.45
ZIC3O60481 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.86■□□□□ 0.45
ZIC3O60481 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ZIC3O60481 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZIC3O60481 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.86■□□□□ 0.45
ZIC3O60481 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.86■□□□□ 0.45
ZIC3O60481 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ZIC3O60481 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.86■□□□□ 0.45
ZIC3O60481 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ZIC3O60481 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZIC3O60481 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZIC3O60481 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.86■□□□□ 0.45
ZIC3O60481 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.86■□□□□ 0.45
ZIC3O60481 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZIC3O60481 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ZIC3O60481 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZIC3O60481 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZIC3O60481 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZIC3O60481 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ZIC3O60481 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ZIC3O60481 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZIC3O60481 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZIC3O60481 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZIC3O60481 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZIC3O60481 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ZIC3O60481 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZIC3O60481 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.85■□□□□ 0.45
ZIC3O60481 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
ZIC3O60481 AP006587.1-201ENST00000534129 1502 ntBASIC17.85■□□□□ 0.45
ZIC3O60481 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.85■□□□□ 0.45
ZIC3O60481 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.85■□□□□ 0.45
ZIC3O60481 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.85■□□□□ 0.45
ZIC3O60481 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.85■□□□□ 0.45
ZIC3O60481 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ZIC3O60481 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.85■□□□□ 0.45
ZIC3O60481 AP006294.2-201ENST00000641667 209 ntBASIC17.85■□□□□ 0.45
ZIC3O60481 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ZIC3O60481 AC112907.3-201ENST00000577781 2400 ntBASIC17.84■□□□□ 0.45
ZIC3O60481 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.84■□□□□ 0.45
ZIC3O60481 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ZIC3O60481 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZIC3O60481 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.84■□□□□ 0.45
ZIC3O60481 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.84■□□□□ 0.45
ZIC3O60481 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ZIC3O60481 AP001271.2-201ENST00000624018 1556 ntBASIC17.84■□□□□ 0.45
ZIC3O60481 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ZIC3O60481 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZIC3O60481 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.84■□□□□ 0.45
ZIC3O60481 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.84■□□□□ 0.45
ZIC3O60481 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.84■□□□□ 0.45
ZIC3O60481 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.84■□□□□ 0.45
ZIC3O60481 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.84■□□□□ 0.45
ZIC3O60481 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZIC3O60481 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZIC3O60481 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZIC3O60481 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZIC3O60481 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.84■□□□□ 0.45
ZIC3O60481 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ZIC3O60481 TCF3P1-201ENST00000423021 1937 ntBASIC17.84■□□□□ 0.45
ZIC3O60481 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.84■□□□□ 0.45
ZIC3O60481 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
ZIC3O60481 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZIC3O60481 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
ZIC3O60481 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.83■□□□□ 0.45
ZIC3O60481 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.83■□□□□ 0.45
ZIC3O60481 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZIC3O60481 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZIC3O60481 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZIC3O60481 KRT16P5-201ENST00000455284 522 ntBASIC17.83■□□□□ 0.44
ZIC3O60481 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZIC3O60481 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.83■□□□□ 0.44
ZIC3O60481 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.83■□□□□ 0.44
ZIC3O60481 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZIC3O60481 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.83■□□□□ 0.44
ZIC3O60481 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZIC3O60481 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZIC3O60481 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ZIC3O60481 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
ZIC3O60481 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZIC3O60481 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ZIC3O60481 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.82■□□□□ 0.44
ZIC3O60481 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZIC3O60481 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms