Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSSCA1O60232 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SSSCA1O60232 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSSCA1O60232 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.14■□□□□ 0.17
SSSCA1O60232 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSSCA1O60232 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSSCA1O60232 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.13■□□□□ 0.17
SSSCA1O60232 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SSSCA1O60232 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.13■□□□□ 0.17
SSSCA1O60232 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SSSCA1O60232 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.13■□□□□ 0.17
SSSCA1O60232 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SSSCA1O60232 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.13■□□□□ 0.17
SSSCA1O60232 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.13■□□□□ 0.17
SSSCA1O60232 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.13■□□□□ 0.17
SSSCA1O60232 AC079140.4-201ENST00000507448 529 ntBASIC16.13■□□□□ 0.17
SSSCA1O60232 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SSSCA1O60232 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.13■□□□□ 0.17
SSSCA1O60232 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.13■□□□□ 0.17
SSSCA1O60232 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.13■□□□□ 0.17
SSSCA1O60232 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.13■□□□□ 0.17
SSSCA1O60232 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SSSCA1O60232 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SSSCA1O60232 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSSCA1O60232 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SSSCA1O60232 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.12■□□□□ 0.17
SSSCA1O60232 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSSCA1O60232 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SSSCA1O60232 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SSSCA1O60232 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSSCA1O60232 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.12■□□□□ 0.17
SSSCA1O60232 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.12■□□□□ 0.17
SSSCA1O60232 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSSCA1O60232 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSSCA1O60232 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSSCA1O60232 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSSCA1O60232 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.12■□□□□ 0.17
SSSCA1O60232 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.12■□□□□ 0.17
SSSCA1O60232 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSSCA1O60232 AC138907.5-202ENST00000569484 235 ntBASIC16.12■□□□□ 0.17
SSSCA1O60232 FAM21FP-204ENST00000608637 956 ntBASIC16.12■□□□□ 0.17
SSSCA1O60232 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SSSCA1O60232 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.12■□□□□ 0.17
SSSCA1O60232 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSSCA1O60232 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSSCA1O60232 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SSSCA1O60232 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSSCA1O60232 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSSCA1O60232 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSSCA1O60232 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSSCA1O60232 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.11■□□□□ 0.17
SSSCA1O60232 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.11■□□□□ 0.17
SSSCA1O60232 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.11■□□□□ 0.17
SSSCA1O60232 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSSCA1O60232 AC007613.1-201ENST00000572811 2597 ntBASIC16.11■□□□□ 0.17
SSSCA1O60232 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
SSSCA1O60232 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSSCA1O60232 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.11■□□□□ 0.17
SSSCA1O60232 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSSCA1O60232 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.11■□□□□ 0.17
SSSCA1O60232 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.11■□□□□ 0.17
SSSCA1O60232 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SSSCA1O60232 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.11■□□□□ 0.17
SSSCA1O60232 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.11■□□□□ 0.17
SSSCA1O60232 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSSCA1O60232 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.11■□□□□ 0.17
SSSCA1O60232 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSSCA1O60232 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.11■□□□□ 0.17
SSSCA1O60232 BCL2-203ENST00000589955 5011 ntBASIC16.11■□□□□ 0.17
SSSCA1O60232 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSSCA1O60232 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SSSCA1O60232 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSSCA1O60232 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSSCA1O60232 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSSCA1O60232 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSSCA1O60232 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.1■□□□□ 0.17
SSSCA1O60232 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSSCA1O60232 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSSCA1O60232 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSSCA1O60232 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSSCA1O60232 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSSCA1O60232 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms