Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SMAD6O43541 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.06■□□□□ 0.8
SMAD6O43541 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.06■□□□□ 0.8
SMAD6O43541 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.06■□□□□ 0.8
SMAD6O43541 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.06■□□□□ 0.8
SMAD6O43541 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.06■□□□□ 0.8
SMAD6O43541 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD6O43541 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD6O43541 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.06■□□□□ 0.8
SMAD6O43541 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SMAD6O43541 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD6O43541 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD6O43541 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD6O43541 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD6O43541 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SMAD6O43541 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD6O43541 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD6O43541 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD6O43541 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD6O43541 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD6O43541 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD6O43541 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.05■□□□□ 0.8
SMAD6O43541 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SMAD6O43541 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SMAD6O43541 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SMAD6O43541 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD6O43541 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.05■□□□□ 0.8
SMAD6O43541 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD6O43541 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SMAD6O43541 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD6O43541 AC112907.3-201ENST00000577781 2400 ntBASIC20.05■□□□□ 0.8
SMAD6O43541 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.05■□□□□ 0.8
SMAD6O43541 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD6O43541 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.05■□□□□ 0.8
SMAD6O43541 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMAD6O43541 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.04■□□□□ 0.8
SMAD6O43541 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SMAD6O43541 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.04■□□□□ 0.8
SMAD6O43541 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.04■□□□□ 0.8
SMAD6O43541 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMAD6O43541 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.04■□□□□ 0.8
SMAD6O43541 AP006587.1-201ENST00000534129 1502 ntBASIC20.04■□□□□ 0.8
SMAD6O43541 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SMAD6O43541 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.04■□□□□ 0.8
SMAD6O43541 RPS2P55-201ENST00000397318 883 ntBASIC20.04■□□□□ 0.8
SMAD6O43541 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.04■□□□□ 0.8
SMAD6O43541 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMAD6O43541 KRT16P5-201ENST00000455284 522 ntBASIC20.04■□□□□ 0.8
SMAD6O43541 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMAD6O43541 AC107956.1-201ENST00000494359 873 ntBASIC20.04■□□□□ 0.8
SMAD6O43541 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.04■□□□□ 0.8
SMAD6O43541 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMAD6O43541 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.04■□□□□ 0.8
SMAD6O43541 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.04■□□□□ 0.8
SMAD6O43541 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMAD6O43541 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMAD6O43541 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMAD6O43541 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SMAD6O43541 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.04■□□□□ 0.8
SMAD6O43541 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMAD6O43541 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.04■□□□□ 0.8
SMAD6O43541 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SMAD6O43541 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMAD6O43541 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMAD6O43541 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMAD6O43541 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SMAD6O43541 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.03■□□□□ 0.8
SMAD6O43541 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMAD6O43541 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.03■□□□□ 0.8
SMAD6O43541 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMAD6O43541 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMAD6O43541 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMAD6O43541 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.03■□□□□ 0.8
SMAD6O43541 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.03■□□□□ 0.8
SMAD6O43541 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SMAD6O43541 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.03■□□□□ 0.8
SMAD6O43541 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SMAD6O43541 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.03■□□□□ 0.8
SMAD6O43541 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMAD6O43541 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMAD6O43541 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMAD6O43541 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMAD6O43541 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SMAD6O43541 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMAD6O43541 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMAD6O43541 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMAD6O43541 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMAD6O43541 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMAD6O43541 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.02■□□□□ 0.8
SMAD6O43541 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SMAD6O43541 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMAD6O43541 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMAD6O43541 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMAD6O43541 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SMAD6O43541 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMAD6O43541 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMAD6O43541 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.02■□□□□ 0.8
SMAD6O43541 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SMAD6O43541 RARRES2P10-201ENST00000564312 460 ntBASIC20.02■□□□□ 0.8
SMAD6O43541 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms