Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.68■□□□□ 0.74
PHGDHO43175 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PHGDHO43175 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.68■□□□□ 0.74
PHGDHO43175 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.68■□□□□ 0.74
PHGDHO43175 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.68■□□□□ 0.74
PHGDHO43175 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PHGDHO43175 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHGDHO43175 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PHGDHO43175 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
PHGDHO43175 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHGDHO43175 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHGDHO43175 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PHGDHO43175 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.67■□□□□ 0.74
PHGDHO43175 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.67■□□□□ 0.74
PHGDHO43175 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.67■□□□□ 0.74
PHGDHO43175 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHGDHO43175 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PHGDHO43175 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.67■□□□□ 0.74
PHGDHO43175 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PHGDHO43175 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
PHGDHO43175 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PHGDHO43175 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PHGDHO43175 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PHGDHO43175 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHGDHO43175 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PHGDHO43175 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHGDHO43175 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHGDHO43175 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.67■□□□□ 0.74
PHGDHO43175 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PHGDHO43175 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.66■□□□□ 0.74
PHGDHO43175 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.66■□□□□ 0.74
PHGDHO43175 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PHGDHO43175 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHGDHO43175 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.66■□□□□ 0.74
PHGDHO43175 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHGDHO43175 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PHGDHO43175 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PHGDHO43175 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHGDHO43175 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PHGDHO43175 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PHGDHO43175 C2orf69P4-201ENST00000565394 541 ntBASIC19.66■□□□□ 0.74
PHGDHO43175 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.66■□□□□ 0.74
PHGDHO43175 AC005181.1-201ENST00000604782 1256 ntBASIC19.66■□□□□ 0.74
PHGDHO43175 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.66■□□□□ 0.74
PHGDHO43175 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.66■□□□□ 0.74
PHGDHO43175 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHGDHO43175 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHGDHO43175 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
PHGDHO43175 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PHGDHO43175 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHGDHO43175 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHGDHO43175 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.66■□□□□ 0.74
PHGDHO43175 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.65■□□□□ 0.74
PHGDHO43175 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.65■□□□□ 0.74
PHGDHO43175 AC098818.2-201ENST00000564925 2320 ntBASIC19.65■□□□□ 0.74
PHGDHO43175 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PHGDHO43175 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHGDHO43175 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.65■□□□□ 0.74
PHGDHO43175 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHGDHO43175 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PHGDHO43175 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PHGDHO43175 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.65■□□□□ 0.74
PHGDHO43175 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PHGDHO43175 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
PHGDHO43175 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.65■□□□□ 0.74
PHGDHO43175 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.65■□□□□ 0.74
PHGDHO43175 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.65■□□□□ 0.74
PHGDHO43175 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.65■□□□□ 0.74
PHGDHO43175 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHGDHO43175 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHGDHO43175 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PHGDHO43175 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PHGDHO43175 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PHGDHO43175 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHGDHO43175 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHGDHO43175 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PHGDHO43175 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHGDHO43175 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHGDHO43175 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PHGDHO43175 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
PHGDHO43175 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PHGDHO43175 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PHGDHO43175 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHGDHO43175 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHGDHO43175 HLA-G-202ENST00000376815 851 ntBASIC19.64■□□□□ 0.73
PHGDHO43175 HLA-G-203ENST00000376818 1127 ntBASIC19.64■□□□□ 0.73
PHGDHO43175 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHGDHO43175 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHGDHO43175 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHGDHO43175 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.64■□□□□ 0.73
PHGDHO43175 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.64■□□□□ 0.73
PHGDHO43175 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHGDHO43175 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHGDHO43175 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHGDHO43175 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.64■□□□□ 0.73
PHGDHO43175 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHGDHO43175 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms