Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SOX1O00570 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.2■□□□□ 0.98
SOX1O00570 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SOX1O00570 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SOX1O00570 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SOX1O00570 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SOX1O00570 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SOX1O00570 AP002469.2-201ENST00000531724 424 ntBASIC21.2■□□□□ 0.98
SOX1O00570 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.2■□□□□ 0.98
SOX1O00570 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.2■□□□□ 0.98
SOX1O00570 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SOX1O00570 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
SOX1O00570 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SOX1O00570 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SOX1O00570 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.2■□□□□ 0.98
SOX1O00570 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SOX1O00570 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.19■□□□□ 0.98
SOX1O00570 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOX1O00570 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOX1O00570 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.19■□□□□ 0.98
SOX1O00570 MRPL3P1-201ENST00000400109 1033 ntBASIC21.19■□□□□ 0.98
SOX1O00570 AC004951.3-201ENST00000418645 1148 ntBASIC21.19■□□□□ 0.98
SOX1O00570 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.19■□□□□ 0.98
SOX1O00570 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.19■□□□□ 0.98
SOX1O00570 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.19■□□□□ 0.98
SOX1O00570 KRT18P1-202ENST00000452408 1331 ntBASIC21.19■□□□□ 0.98
SOX1O00570 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.19■□□□□ 0.98
SOX1O00570 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.19■□□□□ 0.98
SOX1O00570 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.18■□□□□ 0.98
SOX1O00570 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOX1O00570 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOX1O00570 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.18■□□□□ 0.98
SOX1O00570 STARP1-201ENST00000397973 869 ntBASIC21.18■□□□□ 0.98
SOX1O00570 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SOX1O00570 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SOX1O00570 NUS1P1-201ENST00000446295 882 ntBASIC21.18■□□□□ 0.98
SOX1O00570 TSSC2-201ENST00000450217 709 ntBASIC21.18■□□□□ 0.98
SOX1O00570 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.18■□□□□ 0.98
SOX1O00570 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.18■□□□□ 0.98
SOX1O00570 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOX1O00570 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SOX1O00570 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
SOX1O00570 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOX1O00570 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOX1O00570 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOX1O00570 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOX1O00570 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SOX1O00570 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.17■□□□□ 0.98
SOX1O00570 FAM220CP-201ENST00000395253 831 ntBASIC21.17■□□□□ 0.98
SOX1O00570 MIR1233-2-201ENST00000408138 82 ntBASIC21.17■□□□□ 0.98
SOX1O00570 MIR1233-1-201ENST00000408722 82 ntBASIC21.17■□□□□ 0.98
SOX1O00570 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SOX1O00570 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SOX1O00570 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.17■□□□□ 0.98
SOX1O00570 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SOX1O00570 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SOX1O00570 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SOX1O00570 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SOX1O00570 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
SOX1O00570 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOX1O00570 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOX1O00570 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SOX1O00570 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SOX1O00570 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOX1O00570 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOX1O00570 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SOX1O00570 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SOX1O00570 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SOX1O00570 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOX1O00570 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SOX1O00570 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.16■□□□□ 0.98
SOX1O00570 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOX1O00570 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.16■□□□□ 0.98
SOX1O00570 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOX1O00570 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOX1O00570 MIR574-201ENST00000385209 96 ntBASIC21.16■□□□□ 0.98
SOX1O00570 TSPY19P-201ENST00000418461 509 ntBASIC21.16■□□□□ 0.98
SOX1O00570 SPDYE15P-201ENST00000424157 909 ntBASIC21.16■□□□□ 0.98
SOX1O00570 PMS2P1-201ENST00000431037 1228 ntBASIC21.16■□□□□ 0.98
SOX1O00570 TSPY18P-201ENST00000441642 509 ntBASIC21.16■□□□□ 0.98
SOX1O00570 AP002383.4-201ENST00000442518 975 ntBASIC21.16■□□□□ 0.98
SOX1O00570 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.16■□□□□ 0.98
SOX1O00570 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOX1O00570 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SOX1O00570 BX640515.1-201ENST00000617215 977 ntBASIC21.16■□□□□ 0.98
SOX1O00570 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SOX1O00570 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SOX1O00570 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SOX1O00570 AP006587.1-201ENST00000534129 1502 ntBASIC21.15■□□□□ 0.98
SOX1O00570 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SOX1O00570 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.15■□□□□ 0.98
SOX1O00570 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SOX1O00570 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SOX1O00570 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.15■□□□□ 0.98
SOX1O00570 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SOX1O00570 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.15■□□□□ 0.98
SOX1O00570 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
SOX1O00570 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.15■□□□□ 0.98
SOX1O00570 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SOX1O00570 AF228730.7-201ENST00000641842 219 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms