Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TAF4O00268 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TAF4O00268 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TAF4O00268 FAM197Y1-201ENST00000421178 764 ntBASIC19.34■□□□□ 0.69
TAF4O00268 UPK3BP1-201ENST00000428678 509 ntBASIC19.34■□□□□ 0.69
TAF4O00268 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.34■□□□□ 0.69
TAF4O00268 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.34■□□□□ 0.69
TAF4O00268 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TAF4O00268 AP000525.1-201ENST00000608286 694 ntBASIC19.34■□□□□ 0.69
TAF4O00268 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.34■□□□□ 0.69
TAF4O00268 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
TAF4O00268 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TAF4O00268 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.33■□□□□ 0.69
TAF4O00268 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TAF4O00268 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
TAF4O00268 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TAF4O00268 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TAF4O00268 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TAF4O00268 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TAF4O00268 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TAF4O00268 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TAF4O00268 AC026396.1-201ENST00000419388 421 ntBASIC19.33■□□□□ 0.68
TAF4O00268 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.33■□□□□ 0.68
TAF4O00268 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.33■□□□□ 0.68
TAF4O00268 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TAF4O00268 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.33■□□□□ 0.68
TAF4O00268 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TAF4O00268 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TAF4O00268 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TAF4O00268 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TAF4O00268 CYP2D8P-201ENST00000433633 1490 ntBASIC19.33■□□□□ 0.68
TAF4O00268 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TAF4O00268 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.33■□□□□ 0.68
TAF4O00268 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.33■□□□□ 0.68
TAF4O00268 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.32■□□□□ 0.68
TAF4O00268 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TAF4O00268 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
TAF4O00268 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TAF4O00268 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TAF4O00268 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TAF4O00268 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TAF4O00268 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TAF4O00268 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.32■□□□□ 0.68
TAF4O00268 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TAF4O00268 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.32■□□□□ 0.68
TAF4O00268 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.32■□□□□ 0.68
TAF4O00268 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TAF4O00268 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.32■□□□□ 0.68
TAF4O00268 AC005829.2-201ENST00000571422 1056 ntBASIC19.32■□□□□ 0.68
TAF4O00268 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.32■□□□□ 0.68
TAF4O00268 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.32■□□□□ 0.68
TAF4O00268 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TAF4O00268 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TAF4O00268 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TAF4O00268 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TAF4O00268 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.32■□□□□ 0.68
TAF4O00268 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TAF4O00268 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TAF4O00268 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.32■□□□□ 0.68
TAF4O00268 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TAF4O00268 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TAF4O00268 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TAF4O00268 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TAF4O00268 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TAF4O00268 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.31■□□□□ 0.68
TAF4O00268 HTR7P1-201ENST00000538670 1336 ntBASIC19.31■□□□□ 0.68
TAF4O00268 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TAF4O00268 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TAF4O00268 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TAF4O00268 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.31■□□□□ 0.68
TAF4O00268 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TAF4O00268 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TAF4O00268 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TAF4O00268 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TAF4O00268 MIR1238-201ENST00000408483 83 ntBASIC19.31■□□□□ 0.68
TAF4O00268 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TAF4O00268 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TAF4O00268 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.31■□□□□ 0.68
TAF4O00268 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.31■□□□□ 0.68
TAF4O00268 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms