Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SPDYE4A6NLX3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SPDYE4A6NLX3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SPDYE4A6NLX3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
SPDYE4A6NLX3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SPDYE4A6NLX3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
SPDYE4A6NLX3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SPDYE4A6NLX3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
SPDYE4A6NLX3 AC142381.4-202ENST00000563973 229 ntBASIC22.18■■□□□ 1.14
SPDYE4A6NLX3 AL390728.6-201ENST00000566446 1246 ntBASIC22.18■■□□□ 1.14
SPDYE4A6NLX3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.18■■□□□ 1.14
SPDYE4A6NLX3 MYC-209ENST00000641252 345 ntBASIC22.18■■□□□ 1.14
SPDYE4A6NLX3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SPDYE4A6NLX3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
SPDYE4A6NLX3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SPDYE4A6NLX3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SPDYE4A6NLX3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SPDYE4A6NLX3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.17■■□□□ 1.14
SPDYE4A6NLX3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.17■■□□□ 1.14
SPDYE4A6NLX3 AC098590.1-201ENST00000468126 897 ntBASIC22.17■■□□□ 1.14
SPDYE4A6NLX3 HNRNPA1P23-201ENST00000491091 1133 ntBASIC22.17■■□□□ 1.14
SPDYE4A6NLX3 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.17■■□□□ 1.14
SPDYE4A6NLX3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.17■■□□□ 1.14
SPDYE4A6NLX3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SPDYE4A6NLX3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.17■■□□□ 1.14
SPDYE4A6NLX3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SPDYE4A6NLX3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SPDYE4A6NLX3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
SPDYE4A6NLX3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
SPDYE4A6NLX3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
SPDYE4A6NLX3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SPDYE4A6NLX3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 AC061975.6-201ENST00000579045 1553 ntBASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 AC007613.1-201ENST00000572811 2597 ntBASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
SPDYE4A6NLX3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SPDYE4A6NLX3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
SPDYE4A6NLX3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
SPDYE4A6NLX3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
SPDYE4A6NLX3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SPDYE4A6NLX3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SPDYE4A6NLX3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 GCSHP5-201ENST00000443090 522 ntBASIC22.14■■□□□ 1.13
SPDYE4A6NLX3 AC128676.1-201ENST00000454392 318 ntBASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms