Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 KRT18P20-201ENST00000548986 1279 ntBASIC16.89■□□□□ 0.29
TMEM235A6NFC5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM235A6NFC5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 AL356652.1-201ENST00000615962 565 ntBASIC16.88■□□□□ 0.29
TMEM235A6NFC5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.88■□□□□ 0.29
TMEM235A6NFC5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 PGM5P4-201ENST00000421970 445 ntBASIC16.87■□□□□ 0.29
TMEM235A6NFC5 CDV3P1-201ENST00000471403 739 ntBASIC16.87■□□□□ 0.29
TMEM235A6NFC5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM235A6NFC5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 AC097381.1-201ENST00000429019 1296 ntBASIC16.86■□□□□ 0.29
TMEM235A6NFC5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 LINC01465-201ENST00000408887 1940 ntBASIC16.86■□□□□ 0.29
TMEM235A6NFC5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM235A6NFC5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM235A6NFC5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM235A6NFC5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM235A6NFC5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms