Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
TCRBV5S1A1TA0A578 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV5S1A1TA0A578 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TCRBV5S1A1TA0A578 AL355802.2-201ENST00000402069 882 ntBASIC20.72■□□□□ 0.91
TCRBV5S1A1TA0A578 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.72■□□□□ 0.91
TCRBV5S1A1TA0A578 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.72■□□□□ 0.91
TCRBV5S1A1TA0A578 RPS2P52-201ENST00000469610 820 ntBASIC20.72■□□□□ 0.91
TCRBV5S1A1TA0A578 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.72■□□□□ 0.91
TCRBV5S1A1TA0A578 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TCRBV5S1A1TA0A578 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV5S1A1TA0A578 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV5S1A1TA0A578 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TCRBV5S1A1TA0A578 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV5S1A1TA0A578 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TCRBV5S1A1TA0A578 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV5S1A1TA0A578 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV5S1A1TA0A578 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV5S1A1TA0A578 AC116562.4-201ENST00000641316 2276 ntBASIC20.71■□□□□ 0.91
TCRBV5S1A1TA0A578 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV5S1A1TA0A578 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.71■□□□□ 0.91
TCRBV5S1A1TA0A578 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV5S1A1TA0A578 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV5S1A1TA0A578 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV5S1A1TA0A578 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.71■□□□□ 0.91
TCRBV5S1A1TA0A578 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.71■□□□□ 0.91
TCRBV5S1A1TA0A578 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.71■□□□□ 0.91
TCRBV5S1A1TA0A578 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.71■□□□□ 0.91
TCRBV5S1A1TA0A578 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.71■□□□□ 0.91
TCRBV5S1A1TA0A578 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.71■□□□□ 0.91
TCRBV5S1A1TA0A578 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TCRBV5S1A1TA0A578 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV5S1A1TA0A578 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TCRBV5S1A1TA0A578 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV5S1A1TA0A578 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV5S1A1TA0A578 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
TCRBV5S1A1TA0A578 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV5S1A1TA0A578 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TCRBV5S1A1TA0A578 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.69■□□□□ 0.9
TCRBV5S1A1TA0A578 AC120498.8-201ENST00000614275 531 ntBASIC20.69■□□□□ 0.9
TCRBV5S1A1TA0A578 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV5S1A1TA0A578 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TCRBV5S1A1TA0A578 AC093484.2-201ENST00000580996 2166 ntBASIC20.69■□□□□ 0.9
TCRBV5S1A1TA0A578 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.69■□□□□ 0.9
TCRBV5S1A1TA0A578 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 AC007952.6-201ENST00000573168 2673 ntBASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 AC003957.1-201ENST00000625108 2673 ntBASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV5S1A1TA0A578 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV5S1A1TA0A578 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TCRBV5S1A1TA0A578 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
TCRBV5S1A1TA0A578 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.67■□□□□ 0.9
TCRBV5S1A1TA0A578 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
TCRBV5S1A1TA0A578 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV5S1A1TA0A578 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TCRBV5S1A1TA0A578 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TCRBV5S1A1TA0A578 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.67■□□□□ 0.9
TCRBV5S1A1TA0A578 SOX15-203ENST00000570788 1093 ntBASIC20.67■□□□□ 0.9
TCRBV5S1A1TA0A578 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms