Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV6-1A0A0K0K1D8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 LETM1P2-201ENST00000597330 2178 ntBASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AC027612.3-201ENST00000413684 1047 ntBASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AC096631.2-201ENST00000436136 790 ntBASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 MIR6084-201ENST00000622012 110 ntBASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRBV6-1A0A0K0K1D8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 LINC02228-203ENST00000641970 1355 ntBASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-1A0A0K0K1D8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms