Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 TREX1-205ENST00000625293 1783 ntBASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 TSPY26P-201ENST00000476365 1326 ntBASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 AC131281.2-201ENST00000520478 145 ntBASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV34A0A0B4J273 AC093503.3-201ENST00000624917 2352 ntBASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 POU5F1P4-201ENST00000413175 1085 ntBASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 AL356441.2-201ENST00000443009 864 ntBASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 AC245052.3-201ENST00000450182 901 ntBASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 AC008764.7-201ENST00000593779 1081 ntBASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 AC007613.1-201ENST00000572811 2597 ntBASIC15.28■□□□□ 0.04
TRAV34A0A0B4J273 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV34A0A0B4J273 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV34A0A0B4J273 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV34A0A0B4J273 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV34A0A0B4J273 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV34A0A0B4J273 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV34A0A0B4J273 AC116050.2-201ENST00000612102 1779 ntBASIC15.27■□□□□ 0.04
TRAV34A0A0B4J273 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV34A0A0B4J273 UNC93B3-201ENST00000308076 687 ntBASIC15.27■□□□□ 0.04
TRAV34A0A0B4J273 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV34A0A0B4J273 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV34A0A0B4J273 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV34A0A0B4J273 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.27■□□□□ 0.04
TRAV34A0A0B4J273 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV34A0A0B4J273 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV34A0A0B4J273 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV34A0A0B4J273 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV34A0A0B4J273 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV34A0A0B4J273 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV34A0A0B4J273 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV34A0A0B4J273 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV34A0A0B4J273 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV34A0A0B4J273 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV34A0A0B4J273 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV34A0A0B4J273 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV34A0A0B4J273 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TRAV34A0A0B4J273 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV34A0A0B4J273 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV34A0A0B4J273 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 BX119927.1-201ENST00000636596 1552 ntBASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms