Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 AC053503.5-201ENST00000601508 636 ntBASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV12-1A0A0B4J245 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRAV12-1A0A0B4J245 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 MIR4787-201ENST00000607364 84 ntBASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 BRD4-212ENST00000630599 726 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-1A0A0B4J245 AC116050.2-201ENST00000612102 1779 ntBASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 HES6-206ENST00000409574 738 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 RNF146-205ENST00000477776 762 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 EEF1DP3-203ENST00000566025 782 ntBASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 NOC2LP1-202ENST00000452600 2235 ntBASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-1A0A0B4J245 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms