Protein–RNA interactions for Protein: Q6WN34

CHRDL2, Chordin-like protein 2, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2Q6WN34 SAMD12-201ENST00000314727 2172 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 NRF1-204ENST00000393230 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 NCOA6-201ENST00000359003 7081 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 TSC22D2-201ENST00000361875 11154 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 ZMIZ2-205ENST00000433667 3800 ntTSL 5 BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 NUTM1-204ENST00000614490 4196 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 CREB3L4-201ENST00000271889 1750 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 MYH1-201ENST00000226207 6024 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 NPY2R-201ENST00000329476 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 ZNF347-207ENST00000601469 2812 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 L1CAM-201ENST00000361699 3888 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 ZNF623-202ENST00000501748 6759 ntAPPRIS P3 BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 MPP4-212ENST00000620095 2364 ntTSL 5 BASIC10.06□□□□□ -0.8
CHRDL2Q6WN34 GOSR2-240ENST00000640621 3059 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 CYBRD1-201ENST00000321348 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 AF131215.5-201ENST00000530248 1939 ntBASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 IFIH1-201ENST00000263642 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 C14orf159-204ENST00000428926 2538 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 MSH3-201ENST00000265081 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 SIPA1L2-203ENST00000366630 6690 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 RFX2-201ENST00000303657 3993 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 RRP12-211ENST00000536831 4476 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 IL4R-203ENST00000543915 3539 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 TCF7L2-205ENST00000355717 1979 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 ADD1-206ENST00000398129 3787 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 CCDC85C-207ENST00000557769 3793 ntTSL 2 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 PSG8-204ENST00000406636 1610 ntTSL 2 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 SGPL1-202ENST00000373202 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 ATP5E-202ENST00000395659 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 RNU6-858P-201ENST00000362436 107 ntBASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 Y_RNA.19-201ENST00000362462 99 ntBASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 RNU6-1263P-201ENST00000384601 106 ntBASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 TRBV11-1-201ENST00000390367 364 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 MIR1231-201ENST00000408101 92 ntBASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 MIR1302-4-201ENST00000408701 150 ntBASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 PRPS1P2-201ENST00000430496 937 ntBASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 SFTPA3P-201ENST00000446429 367 ntBASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 RPSAP54-201ENST00000454001 886 ntBASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 CYCTP-201ENST00000504253 315 ntBASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 AC011411.1-201ENST00000509592 876 ntBASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 AC063980.1-201ENST00000514282 414 ntTSL 3 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 SNORA25.11-201ENST00000515935 105 ntBASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 SNORA70.23-201ENST00000517218 151 ntBASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 AC022616.6-201ENST00000520479 119 ntBASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 SSR2-215ENST00000529008 849 ntTSL 5 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 AC007406.2-201ENST00000540868 503 ntTSL 5 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 GANAB-216ENST00000540933 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 AC144548.1-201ENST00000549577 324 ntBASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 SRP68P1-201ENST00000584247 269 ntBASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 MAP3K7-205ENST00000369332 4830 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 SEMA6D-203ENST00000355997 5908 ntTSL 5 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 ZFYVE1-208ENST00000556143 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 ZNF728-201ENST00000594710 2015 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 CACNB4-206ENST00000439467 2159 ntTSL 5 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 SYNE1-203ENST00000354674 3154 ntTSL 5 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 TMEM255A-203ENST00000371369 3425 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 ITGAD-201ENST00000389202 3912 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 KIF5A-202ENST00000455537 5824 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 RNF138-202ENST00000261593 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 SELENOP-214ENST00000514985 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 CDC40-202ENST00000368930 1977 ntTSL 2 BASIC10.05□□□□□ -0.8
CHRDL2Q6WN34 CTCFL-216ENST00000608263 4040 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
CHRDL2Q6WN34 ABI1-208ENST00000376160 3515 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
CHRDL2Q6WN34 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC10.04□□□□□ -0.8
CHRDL2Q6WN34 C10orf53-202ENST00000374112 2130 ntTSL 2 BASIC10.04□□□□□ -0.8
CHRDL2Q6WN34 ICA1-204ENST00000396675 2133 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
CHRDL2Q6WN34 AC009948.1-205ENST00000453026 2007 ntTSL 3 BASIC10.04□□□□□ -0.8
CHRDL2Q6WN34 PPP6R3-201ENST00000265636 4794 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CHRDL2Q6WN34 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CHRDL2Q6WN34 MTND5P9-201ENST00000503854 1755 ntBASIC10.04□□□□□ -0.8
CHRDL2Q6WN34 AC009044.1-201ENST00000624577 1798 ntBASIC10.04□□□□□ -0.8
CHRDL2Q6WN34 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
CHRDL2Q6WN34 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms