Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC007159.1-201ENST00000566529 4706 ntBASIC6.02□□□□□ -1.45
SOX3P41225 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX3P41225 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX3P41225 RNA5SP485-201ENST00000365053 119 ntBASIC6.02□□□□□ -1.45
SOX3P41225 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX3P41225 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SOX3P41225 AC245036.1-201ENST00000391727 309 ntBASIC6.02□□□□□ -1.45
SOX3P41225 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SOX3P41225 AL139415.1-201ENST00000424862 352 ntBASIC6.02□□□□□ -1.45
SOX3P41225 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX3P41225 ARMC4P1-201ENST00000438905 707 ntBASIC6.02□□□□□ -1.45
SOX3P41225 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX3P41225 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SOX3P41225 AC236972.4-201ENST00000458091 963 ntBASIC6.02□□□□□ -1.45
SOX3P41225 SEPT14P1-201ENST00000458703 648 ntBASIC6.02□□□□□ -1.45
SOX3P41225 RN7SL39P-201ENST00000462264 297 ntBASIC6.02□□□□□ -1.45
SOX3P41225 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.02□□□□□ -1.45
SOX3P41225 IGHV3-57-201ENST00000520143 280 ntBASIC6.02□□□□□ -1.45
SOX3P41225 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.02□□□□□ -1.45
SOX3P41225 AC022616.2-201ENST00000523185 300 ntBASIC6.02□□□□□ -1.45
SOX3P41225 RPL41P2-201ENST00000544920 409 ntBASIC6.02□□□□□ -1.45
SOX3P41225 AC090115.2-201ENST00000548060 883 ntBASIC6.02□□□□□ -1.45
SOX3P41225 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.02□□□□□ -1.45
SOX3P41225 MT1CP-201ENST00000567054 174 ntBASIC6.02□□□□□ -1.45
SOX3P41225 AL157899.1-201ENST00000604110 936 ntBASIC6.02□□□□□ -1.45
SOX3P41225 AC012676.3-201ENST00000614983 479 ntBASIC6.02□□□□□ -1.45
SOX3P41225 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SOX3P41225 AC114546.4-201ENST00000624413 369 ntBASIC6.02□□□□□ -1.45
SOX3P41225 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.02□□□□□ -1.45
SOX3P41225 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.02□□□□□ -1.45
SOX3P41225 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX3P41225 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.02□□□□□ -1.45
SOX3P41225 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SOX3P41225 AC068769.1-201ENST00000474767 2426 ntBASIC6.01□□□□□ -1.45
SOX3P41225 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX3P41225 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SOX3P41225 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SOX3P41225 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 AC005225.5-201ENST00000623547 2225 ntBASIC6.01□□□□□ -1.45
SOX3P41225 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 AC005332.9-201ENST00000620266 2921 ntBASIC6.01□□□□□ -1.45
SOX3P41225 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SOX3P41225 RNA5SP188-201ENST00000362916 129 ntBASIC6.01□□□□□ -1.45
SOX3P41225 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX3P41225 RNA5SP251-201ENST00000410614 137 ntBASIC6.01□□□□□ -1.45
SOX3P41225 RNA5SP115-201ENST00000411160 107 ntBASIC6.01□□□□□ -1.45
SOX3P41225 THEM7P-201ENST00000419556 672 ntBASIC6.01□□□□□ -1.45
SOX3P41225 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX3P41225 RPSAP32-201ENST00000432681 526 ntBASIC6.01□□□□□ -1.45
SOX3P41225 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX3P41225 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX3P41225 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.01□□□□□ -1.45
SOX3P41225 RPL23AP64-201ENST00000469465 435 ntBASIC6.01□□□□□ -1.45
SOX3P41225 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.01□□□□□ -1.45
SOX3P41225 RN7SL568P-201ENST00000493069 298 ntBASIC6.01□□□□□ -1.45
SOX3P41225 AC018645.1-201ENST00000505003 109 ntBASIC6.01□□□□□ -1.45
SOX3P41225 AC093816.1-201ENST00000515076 913 ntBASIC6.01□□□□□ -1.45
SOX3P41225 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.01□□□□□ -1.45
SOX3P41225 RN7SKP183-201ENST00000517169 324 ntBASIC6.01□□□□□ -1.45
SOX3P41225 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX3P41225 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX3P41225 AC135983.3-201ENST00000528049 1226 ntBASIC6.01□□□□□ -1.45
SOX3P41225 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX3P41225 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX3P41225 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX3P41225 AL078623.1-201ENST00000602702 907 ntBASIC6.01□□□□□ -1.45
SOX3P41225 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX3P41225 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX3P41225 AC005393.1-201ENST00000617916 584 ntBASIC6.01□□□□□ -1.45
SOX3P41225 TCL6_3.1-201ENST00000619064 137 ntBASIC6.01□□□□□ -1.45
SOX3P41225 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX3P41225 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX3P41225 OR8A1-204ENST00000642111 1145 ntBASIC6.01□□□□□ -1.45
SOX3P41225 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SOX3P41225 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX3P41225 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX3P41225 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SOX3P41225 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6□□□□□ -1.45
SOX3P41225 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6□□□□□ -1.45
SOX3P41225 AC090181.3-201ENST00000624777 1514 ntBASIC6□□□□□ -1.45
SOX3P41225 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SOX3P41225 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6□□□□□ -1.45
SOX3P41225 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6□□□□□ -1.45
SOX3P41225 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms