RNA–Protein interactions for RNA: ENST00000221804.4

CLC-201, Transcript of Charcot-Leyden crystal galectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLC, Length 635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLC-201ENST00000221804 AEBP2Q6ZN18 517 aaPredicted RBP26.54■■□□□ 1.84
CLC-201ENST00000221804 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
CLC-201ENST00000221804 SENP3Q9H4L4 574 aaPredicted RBP22.65■■□□□ 1.22
CLC-201ENST00000221804 PHF23Q9BUL5 403 aaPredicted RBP22.62■■□□□ 1.21
CLC-201ENST00000221804 FOXD1Q16676 465 aa20.98■□□□□ 0.95
CLC-201ENST00000221804 PLPPR3Q6T4P5 718 aa20.92■□□□□ 0.94
CLC-201ENST00000221804 ADRA2BP18089 450 aa20.02■□□□□ 0.8
CLC-201ENST00000221804 PPP6R1Q9UPN7 881 aa20.02■□□□□ 0.8
CLC-201ENST00000221804 PIAS4Q8N2W9 510 aaPredicted RBP19.8■□□□□ 0.76
CLC-201ENST00000221804 MSH5O43196 834 aa19.49■□□□□ 0.71
CLC-201ENST00000221804 SCAF1Q9H7N4 1312 aaKnown RBP18.42■□□□□ 0.54
CLC-201ENST00000221804 PPP4R3CPQ6ZMV5 832 aa18.39■□□□□ 0.53
CLC-201ENST00000221804 MAPK8IP2Q13387 824 aaPredicted RBP18.2■□□□□ 0.5
CLC-201ENST00000221804 DMRT2Q9Y5R5 561 aa18.01■□□□□ 0.47
CLC-201ENST00000221804 POTEDQ86YR6 584 aa18■□□□□ 0.47
CLC-201ENST00000221804 CNKSR2Q8WXI2 1034 aa17.93■□□□□ 0.46
CLC-201ENST00000221804 NCBP3Q53F19 620 aaKnown RBP17.92■□□□□ 0.46
CLC-201ENST00000221804 KCNA4P22459 653 aa17.73■□□□□ 0.43
CLC-201ENST00000221804 RNF216Q9NWF9 866 aaPredicted RBP17.61■□□□□ 0.41
CLC-201ENST00000221804 NPM3O75607 178 aaKnown RBP17.57■□□□□ 0.4
CLC-201ENST00000221804 HOXD11P31277 338 aaPredicted RBP17.56■□□□□ 0.4
CLC-201ENST00000221804 DCAF8L1A6NGE4 600 aa17.32■□□□□ 0.36
CLC-201ENST00000221804 NISCHQ9Y2I1 1504 aa17.18■□□□□ 0.34
CLC-201ENST00000221804 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
CLC-201ENST00000221804 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
CLC-201ENST00000221804 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.81■□□□□ 0.28
CLC-201ENST00000221804 RNF39Q9H2S5 420 aa16.63■□□□□ 0.25
CLC-201ENST00000221804 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
CLC-201ENST00000221804 C1QBPQ07021 282 aaKnown RBP16.47■□□□□ 0.23
CLC-201ENST00000221804 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
CLC-201ENST00000221804 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
CLC-201ENST00000221804 CACNB1Q02641 598 aaPredicted RBP16.38■□□□□ 0.21
CLC-201ENST00000221804 MYCNP04198 464 aaPredicted RBP16.29■□□□□ 0.2
CLC-201ENST00000221804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.28■□□□□ 0.2
CLC-201ENST00000221804 HNRNPUL2Q1KMD3 747 aaKnown RBP16.28■□□□□ 0.2
CLC-201ENST00000221804 ZBTB22O15209 634 aa16.27■□□□□ 0.2
CLC-201ENST00000221804 EHMT2Q96KQ7 1210 aa16.22■□□□□ 0.19
CLC-201ENST00000221804 SAMD1Q6SPF0 538 aaPredicted RBP16.19■□□□□ 0.18
CLC-201ENST00000221804 APLP2Q06481 763 aa16.17■□□□□ 0.18
CLC-201ENST00000221804 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
CLC-201ENST00000221804 CAPN15O75808 1086 aa16.05■□□□□ 0.16
CLC-201ENST00000221804 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
CLC-201ENST00000221804 ZNF219Q9P2Y4 722 aaPredicted RBP15.93■□□□□ 0.14
CLC-201ENST00000221804 TRHP20396 242 aaPredicted RBP15.92■□□□□ 0.14
CLC-201ENST00000221804 ATXN8OSP0DMR3 200 aa15.87■□□□□ 0.13
CLC-201ENST00000221804 ABCC9O60706 1549 aa15.87■□□□□ 0.13
CLC-201ENST00000221804 ATF5Q9Y2D1 282 aaPredicted RBP15.79■□□□□ 0.12
CLC-201ENST00000221804 DSG3P32926 999 aa15.77■□□□□ 0.12
CLC-201ENST00000221804 ABCB7O75027 752 aa15.69■□□□□ 0.1
CLC-201ENST00000221804 CCDC180Q9P1Z9 1646 aa15.61■□□□□ 0.09
CLC-201ENST00000221804 POLA2Q14181 598 aa15.6■□□□□ 0.09
CLC-201ENST00000221804 ZBTB12Q9Y330 459 aaPredicted RBP15.39■□□□□ 0.05
CLC-201ENST00000221804 FBLN2P98095 1184 aa15.26■□□□□ 0.03
CLC-201ENST00000221804 RBM42Q9BTD8 480 aaKnown RBP15.11■□□□□ 0.01
CLC-201ENST00000221804 MKRN4PQ13434 485 aaPredicted RBP15.09■□□□□ 0.01
CLC-201ENST00000221804 OSCARQ8IYS5 282 aa15.07■□□□□ 0
CLC-201ENST00000221804 RB1CC1Q8TDY2 1594 aa15.01□□□□□ -0.01
CLC-201ENST00000221804 SPDYE2BA6NHP3 402 aa14.93□□□□□ -0.02
CLC-201ENST00000221804 SPDYE6P0CI01 402 aa14.93□□□□□ -0.02
CLC-201ENST00000221804 SPDYE2Q495Y8 402 aa14.93□□□□□ -0.02
CLC-201ENST00000221804 NACADO15069 1562 aa14.85□□□□□ -0.03
CLC-201ENST00000221804 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
CLC-201ENST00000221804 ZNF692Q9BU19 519 aaPredicted RBP14.85□□□□□ -0.03
CLC-201ENST00000221804 SSUH2Q9Y2M2 353 aa14.75□□□□□ -0.05
CLC-201ENST00000221804 SPDYE4A6NLX3 237 aa14.74□□□□□ -0.05
CLC-201ENST00000221804 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
CLC-201ENST00000221804 UNC13AQ9UPW8 1703 aa14.69□□□□□ -0.06
CLC-201ENST00000221804 REM2Q8IYK8 340 aaPredicted RBP14.68□□□□□ -0.06
CLC-201ENST00000221804 BICRAQ9NZM4 1560 aa14.64□□□□□ -0.07
CLC-201ENST00000221804 MYO15BQ96JP2 1530 aa14.61□□□□□ -0.07
CLC-201ENST00000221804 DNAJC5Q9H3Z4 198 aa14.6□□□□□ -0.07
CLC-201ENST00000221804 FKBP8Q14318 412 aa14.59□□□□□ -0.07
CLC-201ENST00000221804 SPDYE1Q8NFV5 336 aaPredicted RBP14.54□□□□□ -0.08
CLC-201ENST00000221804 PITPNM1O00562 1244 aa14.51□□□□□ -0.09
CLC-201ENST00000221804 CHRDL2Q6WN34 429 aa14.51□□□□□ -0.09
CLC-201ENST00000221804 CLEC11AQ9Y240 323 aa14.49□□□□□ -0.09
CLC-201ENST00000221804 DCAF8L2P0C7V8 631 aa14.48□□□□□ -0.09
CLC-201ENST00000221804 SHROOM4Q9ULL8 1493 aa14.44□□□□□ -0.1
CLC-201ENST00000221804 PROM2Q8N271 834 aa14.41□□□□□ -0.1
CLC-201ENST00000221804 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
CLC-201ENST00000221804 CECR2Q9BXF3 1484 aa14.38□□□□□ -0.11
CLC-201ENST00000221804 CC2D2AQ9P2K1 1620 aa14.37□□□□□ -0.11
CLC-201ENST00000221804 PRR29P0C7W0 189 aa14.34□□□□□ -0.11
CLC-201ENST00000221804 FXR2P51116 673 aaKnown RBP eCLIP14.26□□□□□ -0.13
CLC-201ENST00000221804 PIP4P2Q8N4L2 257 aa14.26□□□□□ -0.13
CLC-201ENST00000221804 EIF4G1Q04637 1599 aaKnown RBP14.26□□□□□ -0.13
CLC-201ENST00000221804 POTEHQ6S545 545 aa14.25□□□□□ -0.13
CLC-201ENST00000221804 DCAF1Q9Y4B6 1507 aa14.25□□□□□ -0.13
CLC-201ENST00000221804 PRKAR2AP13861 404 aaKnown RBP14.17□□□□□ -0.14
CLC-201ENST00000221804 FBXO3Q9UK99 471 aa14.17□□□□□ -0.14
CLC-201ENST00000221804 ZCCHC6Q5VYS8 1495 aaKnown RBP14.14□□□□□ -0.15
CLC-201ENST00000221804 CHADLQ6NUI6 762 aa14.1□□□□□ -0.15
CLC-201ENST00000221804 SCRIBQ14160 1630 aa14.06□□□□□ -0.16
CLC-201ENST00000221804 PLEKHG5O94827 1062 aa14.05□□□□□ -0.16
CLC-201ENST00000221804 CREBZFQ9NS37 354 aa14.05□□□□□ -0.16
CLC-201ENST00000221804 MIER1Q8N108 512 aa14.03□□□□□ -0.16
CLC-201ENST00000221804 PLCD3Q8N3E9 789 aa14.01□□□□□ -0.17
CLC-201ENST00000221804 FARP1Q9Y4F1 1045 aaPredicted RBP13.97□□□□□ -0.17
CLC-201ENST00000221804 CUX2O14529 1486 aa13.93□□□□□ -0.18
CLC-201ENST00000221804 VASPP50552 380 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms