Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 SLC35E1P1-201ENST00000419313 864 ntBASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 AC012519.1-201ENST00000424588 610 ntBASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 AL360081.1-201ENST00000428299 555 ntBASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 RN7SL591P-201ENST00000496150 292 ntBASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 AC105233.1-201ENST00000498840 781 ntBASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 AC022832.1-201ENST00000530718 645 ntBASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 OR4A42P-201ENST00000531397 938 ntBASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 FXNP1-201ENST00000555153 337 ntBASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 MIR1254-2-201ENST00000579553 63 ntBASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 AC073869.10-201ENST00000642016 354 ntBASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 THADA-202ENST00000402360 2974 ntTSL 5 BASIC9.78□□□□□ -0.84
RIMBP3Q9UFD9 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
RIMBP3Q9UFD9 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC9.77□□□□□ -0.84
RIMBP3Q9UFD9 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
RIMBP3Q9UFD9 BTBD7-202ENST00000334746 8430 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
RIMBP3Q9UFD9 AC119674.1-202ENST00000641333 1860 ntBASIC9.77□□□□□ -0.84
RIMBP3Q9UFD9 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
RIMBP3Q9UFD9 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
RIMBP3Q9UFD9 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
RIMBP3Q9UFD9 AC025809.2-201ENST00000625085 1802 ntBASIC9.77□□□□□ -0.84
RIMBP3Q9UFD9 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.84
RIMBP3Q9UFD9 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
RIMBP3Q9UFD9 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RIMBP3Q9UFD9 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RIMBP3Q9UFD9 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RIMBP3Q9UFD9 AC093278.2-201ENST00000564956 2485 ntBASIC9.77□□□□□ -0.85
RIMBP3Q9UFD9 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RIMBP3Q9UFD9 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC9.77□□□□□ -0.85
RIMBP3Q9UFD9 RPS26P41-201ENST00000450370 284 ntBASIC9.77□□□□□ -0.85
RIMBP3Q9UFD9 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC9.77□□□□□ -0.85
RIMBP3Q9UFD9 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC9.77□□□□□ -0.85
RIMBP3Q9UFD9 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RIMBP3Q9UFD9 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
RIMBP3Q9UFD9 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC9.77□□□□□ -0.85
RIMBP3Q9UFD9 ATP8A1-201ENST00000264449 8209 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RIMBP3Q9UFD9 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
RIMBP3Q9UFD9 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
RIMBP3Q9UFD9 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
RIMBP3Q9UFD9 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 AP001527.1-201ENST00000566440 1957 ntBASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 AC009804.1-201ENST00000400949 179 ntBASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 AL049872.1-201ENST00000556323 322 ntBASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 ERG-210ENST00000442448 5034 ntTSL 5 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 PLCXD2-205ENST00000636933 7710 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RIMBP3Q9UFD9 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 ERMN-202ENST00000409216 746 ntTSL 4 BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 GABARAPL3-201ENST00000412799 354 ntBASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 AC016712.1-201ENST00000431088 378 ntBASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 CYCSP12-201ENST00000437729 300 ntBASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 AC016144.1-201ENST00000548175 1087 ntBASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 AL021918.2-201ENST00000613415 194 ntBASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC9.75□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms