Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC8.55□□□□□ -1.04
HLA-CQ95604 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.55□□□□□ -1.04
HLA-CQ95604 LINC01531-202ENST00000536898 3312 ntTSL 2 BASIC8.55□□□□□ -1.04
HLA-CQ95604 AC240565.2-201ENST00000623180 2096 ntTSL 5 BASIC8.55□□□□□ -1.04
HLA-CQ95604 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 RNF38-206ENST00000377885 4985 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
HLA-CQ95604 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC8.55□□□□□ -1.04
HLA-CQ95604 ZNF443-201ENST00000301547 2663 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 DSG4-201ENST00000308128 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HLA-CQ95604 AC135352.1-201ENST00000506173 1418 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
HLA-CQ95604 BX284613.1-201ENST00000452221 1641 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 EIF4BP6-201ENST00000431936 1828 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AL049776.1-201ENST00000624600 2025 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC8.54□□□□□ -1.04
HLA-CQ95604 CREM-204ENST00000345491 2220 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-CQ95604 HBS1L-204ENST00000367826 2703 ntTSL 2 BASIC8.54□□□□□ -1.04
HLA-CQ95604 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC8.54□□□□□ -1.04
HLA-CQ95604 RNF185-203ENST00000426256 3315 ntTSL 2 BASIC8.54□□□□□ -1.04
HLA-CQ95604 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-CQ95604 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-CQ95604 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC8.54□□□□□ -1.04
HLA-CQ95604 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-CQ95604 DDR2-201ENST00000367921 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-CQ95604 CPEB1-207ENST00000611031 3074 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
HLA-CQ95604 FGFR2-209ENST00000369056 2650 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-CQ95604 PIEZO2-204ENST00000538948 2671 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
HLA-CQ95604 USP2-AS1-201ENST00000498979 2486 ntTSL 3 BASIC8.54□□□□□ -1.04
HLA-CQ95604 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC8.54□□□□□ -1.04
HLA-CQ95604 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-CQ95604 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AC103591.2-201ENST00000265259 766 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 ZNF366-201ENST00000318442 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-CQ95604 RPL11P4-201ENST00000332269 436 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 RNU6-660P-201ENST00000364566 109 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC8.54□□□□□ -1.04
HLA-CQ95604 MED28P1-201ENST00000399158 571 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 PKMP3-201ENST00000405497 715 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 CCNYL3-201ENST00000407030 998 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AC011753.4-201ENST00000417974 311 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC8.54□□□□□ -1.04
HLA-CQ95604 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC8.54□□□□□ -1.04
HLA-CQ95604 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC8.54□□□□□ -1.04
HLA-CQ95604 NIP7P1-201ENST00000433227 512 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AC234064.1-201ENST00000436312 247 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 RPS7P4-201ENST00000444127 582 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 YWHABP1-201ENST00000445359 727 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC8.54□□□□□ -1.04
HLA-CQ95604 PDSS1P2-201ENST00000449397 678 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 RPL7P31-201ENST00000450192 724 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC8.54□□□□□ -1.04
HLA-CQ95604 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-CQ95604 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC8.54□□□□□ -1.04
HLA-CQ95604 AC079841.1-201ENST00000481228 950 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AC116353.1-201ENST00000489727 316 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC8.54□□□□□ -1.04
HLA-CQ95604 IGHVII-26-2-201ENST00000518751 325 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AC087808.1-201ENST00000520501 361 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC8.54□□□□□ -1.04
HLA-CQ95604 AP000619.1-201ENST00000540293 1000 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 THAP2-202ENST00000547843 672 ntTSL 2 BASIC8.54□□□□□ -1.04
HLA-CQ95604 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC8.54□□□□□ -1.04
HLA-CQ95604 NF1P12-201ENST00000549593 583 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 GTF2IP22-201ENST00000554443 182 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC8.54□□□□□ -1.04
HLA-CQ95604 AC087477.6-201ENST00000559595 843 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC8.54□□□□□ -1.04
HLA-CQ95604 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC8.54□□□□□ -1.04
HLA-CQ95604 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC8.54□□□□□ -1.04
HLA-CQ95604 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC8.54□□□□□ -1.04
HLA-CQ95604 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC8.54□□□□□ -1.04
HLA-CQ95604 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC8.54□□□□□ -1.04
HLA-CQ95604 VDAC1P5-201ENST00000603132 844 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AC129492.5-201ENST00000603489 315 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AC010385.2-201ENST00000603743 490 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC8.54□□□□□ -1.04
HLA-CQ95604 AC016405.2-201ENST00000607393 312 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AC106782.6-201ENST00000611264 512 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC8.54□□□□□ -1.04
HLA-CQ95604 AC040978.1-201ENST00000617244 1282 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC8.54□□□□□ -1.04
HLA-CQ95604 AC010338.1-201ENST00000621823 717 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 TMPRSS4-220ENST00000618855 3531 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-CQ95604 PAPD4-202ENST00000423041 3223 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-CQ95604 STRIP1-202ENST00000369796 3125 ntTSL 2 BASIC8.54□□□□□ -1.04
HLA-CQ95604 AL392183.1-201ENST00000606622 2436 ntTSL 4 BASIC8.54□□□□□ -1.04
HLA-CQ95604 ZNF169-201ENST00000340911 2336 ntTSL 2 BASIC8.54□□□□□ -1.04
HLA-CQ95604 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
HLA-CQ95604 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
HLA-CQ95604 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-CQ95604 NAP1L1-203ENST00000431879 2031 ntTSL 2 BASIC8.54□□□□□ -1.04
HLA-CQ95604 AC090229.1-201ENST00000590983 1609 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-CQ95604 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-CQ95604 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC8.54□□□□□ -1.04
HLA-CQ95604 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC8.54□□□□□ -1.04
HLA-CQ95604 AL022578.1-201ENST00000439330 1433 ntBASIC8.54□□□□□ -1.04
HLA-CQ95604 AC011330.1-201ENST00000510070 3235 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms