RNA–Protein interactions for RNA: ENST00000528119.1

LINC02546-202, Transcript of long intergenic non-protein coding RNA 2546, humanhuman

TSL 5 BASIC

Gene LINC02546, Length 801 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02546-202ENST00000528119 AEBP2Q6ZN18 517 aaPredicted RBP22.59■■□□□ 1.21
LINC02546-202ENST00000528119 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
LINC02546-202ENST00000528119 SENP3Q9H4L4 574 aaPredicted RBP19.18■□□□□ 0.66
LINC02546-202ENST00000528119 PHF23Q9BUL5 403 aaPredicted RBP18.99■□□□□ 0.63
LINC02546-202ENST00000528119 FOXD1Q16676 465 aa17.89■□□□□ 0.45
LINC02546-202ENST00000528119 PLPPR3Q6T4P5 718 aa17.33■□□□□ 0.36
LINC02546-202ENST00000528119 PPP6R1Q9UPN7 881 aa16.9■□□□□ 0.3
LINC02546-202ENST00000528119 ADRA2BP18089 450 aa16.86■□□□□ 0.29
LINC02546-202ENST00000528119 PIAS4Q8N2W9 510 aaPredicted RBP16.76■□□□□ 0.27
LINC02546-202ENST00000528119 MSH5O43196 834 aa16.61■□□□□ 0.25
LINC02546-202ENST00000528119 POTEDQ86YR6 584 aa15.93■□□□□ 0.14
LINC02546-202ENST00000528119 MAPK8IP2Q13387 824 aaPredicted RBP15.43■□□□□ 0.06
LINC02546-202ENST00000528119 SCAF1Q9H7N4 1312 aaKnown RBP15.34■□□□□ 0.05
LINC02546-202ENST00000528119 PPP4R3CPQ6ZMV5 832 aa15.25■□□□□ 0.03
LINC02546-202ENST00000528119 DMRT2Q9Y5R5 561 aa15.25■□□□□ 0.03
LINC02546-202ENST00000528119 CNKSR2Q8WXI2 1034 aa14.89□□□□□ -0.03
LINC02546-202ENST00000528119 HOXD11P31277 338 aaPredicted RBP14.77□□□□□ -0.05
LINC02546-202ENST00000528119 RNF216Q9NWF9 866 aaPredicted RBP14.7□□□□□ -0.06
LINC02546-202ENST00000528119 NCBP3Q53F19 620 aaKnown RBP14.67□□□□□ -0.06
LINC02546-202ENST00000528119 DCAF8L1A6NGE4 600 aa14.63□□□□□ -0.07
LINC02546-202ENST00000528119 NPM3O75607 178 aaKnown RBP14.51□□□□□ -0.09
LINC02546-202ENST00000528119 KCNA4P22459 653 aa14.44□□□□□ -0.1
LINC02546-202ENST00000528119 RNF39Q9H2S5 420 aa14.22□□□□□ -0.13
LINC02546-202ENST00000528119 DNAJC5BQ9UF47 199 aa14.17□□□□□ -0.14
LINC02546-202ENST00000528119 CACNB1Q02641 598 aaPredicted RBP14.16□□□□□ -0.14
LINC02546-202ENST00000528119 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.07□□□□□ -0.16
LINC02546-202ENST00000528119 C1QBPQ07021 282 aaKnown RBP14□□□□□ -0.17
LINC02546-202ENST00000528119 SLC4A2P04920 1241 aa13.83□□□□□ -0.2
LINC02546-202ENST00000528119 U3KPZ7 1027 aaPredicted RBP13.83□□□□□ -0.2
LINC02546-202ENST00000528119 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
LINC02546-202ENST00000528119 SPINK5Q9NQ38 1064 aaPredicted RBP13.58□□□□□ -0.24
LINC02546-202ENST00000528119 CAPN15O75808 1086 aa13.51□□□□□ -0.25
LINC02546-202ENST00000528119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.43□□□□□ -0.26
LINC02546-202ENST00000528119 HNRNPUL2Q1KMD3 747 aaKnown RBP13.43□□□□□ -0.26
LINC02546-202ENST00000528119 MYCNP04198 464 aaPredicted RBP13.4□□□□□ -0.26
LINC02546-202ENST00000528119 DSG3P32926 999 aa13.39□□□□□ -0.27
LINC02546-202ENST00000528119 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
LINC02546-202ENST00000528119 FOXD4L1Q9NU39 408 aa13.38□□□□□ -0.27
LINC02546-202ENST00000528119 APLP2Q06481 763 aa13.37□□□□□ -0.27
LINC02546-202ENST00000528119 TRHP20396 242 aaPredicted RBP13.36□□□□□ -0.27
LINC02546-202ENST00000528119 ZBTB22O15209 634 aa13.3□□□□□ -0.28
LINC02546-202ENST00000528119 ZNF219Q9P2Y4 722 aaPredicted RBP13.3□□□□□ -0.28
LINC02546-202ENST00000528119 ABCB7O75027 752 aa13.25□□□□□ -0.29
LINC02546-202ENST00000528119 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
LINC02546-202ENST00000528119 POLA2Q14181 598 aa13.03□□□□□ -0.32
LINC02546-202ENST00000528119 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
LINC02546-202ENST00000528119 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
LINC02546-202ENST00000528119 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
LINC02546-202ENST00000528119 ZBTB12Q9Y330 459 aaPredicted RBP12.74□□□□□ -0.37
LINC02546-202ENST00000528119 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
LINC02546-202ENST00000528119 OSCARQ8IYS5 282 aa12.64□□□□□ -0.39
LINC02546-202ENST00000528119 FBLN2P98095 1184 aa12.53□□□□□ -0.4
LINC02546-202ENST00000528119 MKRN4PQ13434 485 aaPredicted RBP12.53□□□□□ -0.4
LINC02546-202ENST00000528119 POTEHQ6S545 545 aa12.51□□□□□ -0.41
LINC02546-202ENST00000528119 AKT1S1Q96B36 256 aa12.49□□□□□ -0.41
LINC02546-202ENST00000528119 CHRDL2Q6WN34 429 aa12.41□□□□□ -0.42
LINC02546-202ENST00000528119 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.42
LINC02546-202ENST00000528119 SPDYE2BA6NHP3 402 aa12.38□□□□□ -0.43
LINC02546-202ENST00000528119 SPDYE6P0CI01 402 aa12.38□□□□□ -0.43
LINC02546-202ENST00000528119 SPDYE2Q495Y8 402 aa12.38□□□□□ -0.43
LINC02546-202ENST00000528119 PITPNM1O00562 1244 aa12.28□□□□□ -0.44
LINC02546-202ENST00000528119 ZNF692Q9BU19 519 aaPredicted RBP12.28□□□□□ -0.44
LINC02546-202ENST00000528119 SSUH2Q9Y2M2 353 aa12.27□□□□□ -0.45
LINC02546-202ENST00000528119 PIP4P2Q8N4L2 257 aa12.17□□□□□ -0.46
LINC02546-202ENST00000528119 PABPN1Q86U42 306 aaKnown RBP eCLIP12.13□□□□□ -0.47
LINC02546-202ENST00000528119 SPDYE1Q8NFV5 336 aaPredicted RBP12.12□□□□□ -0.47
LINC02546-202ENST00000528119 CLEC11AQ9Y240 323 aa12.12□□□□□ -0.47
LINC02546-202ENST00000528119 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC02546-202ENST00000528119 SPDYE4A6NLX3 237 aa12□□□□□ -0.49
LINC02546-202ENST00000528119 PRKAR2AP13861 404 aaKnown RBP11.96□□□□□ -0.49
LINC02546-202ENST00000528119 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
LINC02546-202ENST00000528119 CHADLQ6NUI6 762 aa11.9□□□□□ -0.5
LINC02546-202ENST00000528119 HAX1O00165 279 aa11.88□□□□□ -0.51
LINC02546-202ENST00000528119 SP7Q8TDD2 431 aaPredicted RBP11.81□□□□□ -0.52
LINC02546-202ENST00000528119 EVX2Q03828 476 aa11.79□□□□□ -0.52
LINC02546-202ENST00000528119 STAG3Q9UJ98 1225 aa11.78□□□□□ -0.52
LINC02546-202ENST00000528119 PROM2Q8N271 834 aa11.75□□□□□ -0.53
LINC02546-202ENST00000528119 C19orf67A6NJJ6 358 aa11.72□□□□□ -0.53
LINC02546-202ENST00000528119 CREBZFQ9NS37 354 aa11.71□□□□□ -0.53
LINC02546-202ENST00000528119 FARP1Q9Y4F1 1045 aaPredicted RBP11.71□□□□□ -0.53
LINC02546-202ENST00000528119 FKBP8Q14318 412 aa11.63□□□□□ -0.55
LINC02546-202ENST00000528119 CD44P16070 742 aaKnown RBP11.59□□□□□ -0.55
LINC02546-202ENST00000528119 MNX1P50219 401 aaPredicted RBP11.54□□□□□ -0.56
LINC02546-202ENST00000528119 GABBR2O75899 941 aa11.51□□□□□ -0.57
LINC02546-202ENST00000528119 ZRANB1Q9UGI0 708 aa11.46□□□□□ -0.57
LINC02546-202ENST00000528119 NPM1P06748 294 aaKnown RBP eCLIP11.44□□□□□ -0.58
LINC02546-202ENST00000528119 MIER1Q8N108 512 aa11.42□□□□□ -0.58
LINC02546-202ENST00000528119 ZNF579Q8NAF0 562 aaKnown RBP11.41□□□□□ -0.58
LINC02546-202ENST00000528119 PAK3O75914 559 aaPredicted RBP11.37□□□□□ -0.59
LINC02546-202ENST00000528119 PLCD3Q8N3E9 789 aa11.35□□□□□ -0.59
LINC02546-202ENST00000528119 PHF12Q96QT6 1004 aa11.35□□□□□ -0.59
LINC02546-202ENST00000528119 PLEKHG5O94827 1062 aa11.34□□□□□ -0.59
LINC02546-202ENST00000528119 CLCN6P51797 869 aa11.31□□□□□ -0.6
LINC02546-202ENST00000528119 TSPYL2Q9H2G4 693 aaPredicted RBP11.3□□□□□ -0.6
LINC02546-202ENST00000528119 GALR2O43603 387 aaPredicted RBP11.29□□□□□ -0.6
LINC02546-202ENST00000528119 POTEIP0CG38 1075 aa11.29□□□□□ -0.6
LINC02546-202ENST00000528119 FBXO3Q9UK99 471 aa11.27□□□□□ -0.61
LINC02546-202ENST00000528119 RASEFQ8IZ41 740 aa11.26□□□□□ -0.61
LINC02546-202ENST00000528119 CCDC61Q9Y6R9 512 aa11.23□□□□□ -0.61
LINC02546-202ENST00000528119 DCBLD2Q96PD2 775 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms