Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 AC009879.1-201ENST00000520029 839 ntBASIC9.8□□□□□ -0.84
VPS8Q8N3P4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 LINC00556-201ENST00000569603 412 ntBASIC9.8□□□□□ -0.84
VPS8Q8N3P4 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 SNORA21-201ENST00000362423 132 ntBASIC9.79□□□□□ -0.84
VPS8Q8N3P4 AL096711.1-201ENST00000404780 554 ntBASIC9.79□□□□□ -0.84
VPS8Q8N3P4 ATP5A1P8-201ENST00000423669 1291 ntBASIC9.79□□□□□ -0.84
VPS8Q8N3P4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 RN7SL221P-201ENST00000466190 281 ntBASIC9.79□□□□□ -0.84
VPS8Q8N3P4 PFN2-209ENST00000481275 560 ntTSL 4 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 AC011497.2-201ENST00000600255 639 ntBASIC9.79□□□□□ -0.84
VPS8Q8N3P4 AC025262.3-201ENST00000623666 360 ntBASIC9.79□□□□□ -0.84
VPS8Q8N3P4 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC9.79□□□□□ -0.84
VPS8Q8N3P4 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 AC005034.3-201ENST00000604845 1747 ntBASIC9.78□□□□□ -0.84
VPS8Q8N3P4 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 AC007406.5-201ENST00000570140 3170 ntBASIC9.78□□□□□ -0.84
VPS8Q8N3P4 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 RNA5SP478-201ENST00000364657 115 ntBASIC9.78□□□□□ -0.84
VPS8Q8N3P4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 IGLV3-4-201ENST00000432300 244 ntBASIC9.78□□□□□ -0.84
VPS8Q8N3P4 CT45A11P-201ENST00000448043 1134 ntBASIC9.78□□□□□ -0.84
VPS8Q8N3P4 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 AC068228.1-201ENST00000461723 211 ntBASIC9.78□□□□□ -0.84
VPS8Q8N3P4 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 B4GALNT2P1-201ENST00000508857 307 ntBASIC9.78□□□□□ -0.84
VPS8Q8N3P4 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 AC021269.1-201ENST00000526860 705 ntBASIC9.78□□□□□ -0.84
VPS8Q8N3P4 AC092865.1-201ENST00000544395 1023 ntBASIC9.78□□□□□ -0.84
VPS8Q8N3P4 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 AC024589.2-201ENST00000605642 1294 ntBASIC9.78□□□□□ -0.84
VPS8Q8N3P4 AC024884.1-201ENST00000620583 399 ntBASIC9.78□□□□□ -0.84
VPS8Q8N3P4 AL359742.1-201ENST00000622497 540 ntBASIC9.78□□□□□ -0.84
VPS8Q8N3P4 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 LINC01616-201ENST00000561816 2280 ntBASIC9.78□□□□□ -0.84
VPS8Q8N3P4 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS8Q8N3P4 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
VPS8Q8N3P4 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 AC022325.1-201ENST00000502748 2199 ntBASIC9.77□□□□□ -0.85
VPS8Q8N3P4 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 MIR433-201ENST00000384837 93 ntBASIC9.77□□□□□ -0.85
VPS8Q8N3P4 MIR621-201ENST00000384919 96 ntBASIC9.77□□□□□ -0.85
VPS8Q8N3P4 RAB5CP1-201ENST00000395972 580 ntBASIC9.77□□□□□ -0.85
VPS8Q8N3P4 AL353626.3-201ENST00000413399 657 ntBASIC9.77□□□□□ -0.85
VPS8Q8N3P4 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms