Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.3□□□□□ -1.56
LMO4P61968 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.3□□□□□ -1.56
LMO4P61968 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC5.3□□□□□ -1.56
LMO4P61968 AL713922.1-201ENST00000416477 747 ntBASIC5.3□□□□□ -1.56
LMO4P61968 VN1R3-201ENST00000418822 919 ntBASIC5.3□□□□□ -1.56
LMO4P61968 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 KCTD9P1-201ENST00000430462 1167 ntBASIC5.3□□□□□ -1.56
LMO4P61968 AMYP1-201ENST00000440059 1023 ntBASIC5.3□□□□□ -1.56
LMO4P61968 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.3□□□□□ -1.56
LMO4P61968 AL358876.1-201ENST00000453364 1075 ntBASIC5.3□□□□□ -1.56
LMO4P61968 RPL12P30-201ENST00000488389 499 ntBASIC5.3□□□□□ -1.56
LMO4P61968 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.3□□□□□ -1.56
LMO4P61968 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 AC022784.5-201ENST00000522241 437 ntBASIC5.3□□□□□ -1.56
LMO4P61968 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.3□□□□□ -1.56
LMO4P61968 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
LMO4P61968 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.3□□□□□ -1.56
LMO4P61968 AC005726.4-201ENST00000582858 458 ntBASIC5.3□□□□□ -1.56
LMO4P61968 MIR4701-201ENST00000583094 63 ntBASIC5.3□□□□□ -1.56
LMO4P61968 AL078623.1-201ENST00000602702 907 ntBASIC5.3□□□□□ -1.56
LMO4P61968 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.3□□□□□ -1.56
LMO4P61968 AL359704.2-201ENST00000604335 521 ntBASIC5.3□□□□□ -1.56
LMO4P61968 AL161912.3-201ENST00000605404 628 ntBASIC5.3□□□□□ -1.56
LMO4P61968 AC091167.5-201ENST00000605689 894 ntBASIC5.3□□□□□ -1.56
LMO4P61968 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.3□□□□□ -1.56
LMO4P61968 AL080312.2-201ENST00000613001 630 ntBASIC5.3□□□□□ -1.56
LMO4P61968 AC087821.1-201ENST00000623639 567 ntBASIC5.3□□□□□ -1.56
LMO4P61968 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.3□□□□□ -1.56
LMO4P61968 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.3□□□□□ -1.56
LMO4P61968 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 APP-206ENST00000359726 3294 ntTSL 2 BASIC5.3□□□□□ -1.56
LMO4P61968 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
LMO4P61968 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LMO4P61968 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LMO4P61968 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC5.3□□□□□ -1.56
LMO4P61968 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.29□□□□□ -1.56
LMO4P61968 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.29□□□□□ -1.56
LMO4P61968 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LMO4P61968 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 NEK2P2-201ENST00000438441 1338 ntBASIC5.29□□□□□ -1.56
LMO4P61968 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC5.29□□□□□ -1.56
LMO4P61968 BX322650.1-201ENST00000332359 2143 ntBASIC5.29□□□□□ -1.56
LMO4P61968 AL023806.3-201ENST00000638502 2704 ntBASIC5.29□□□□□ -1.56
LMO4P61968 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.29□□□□□ -1.56
LMO4P61968 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
LMO4P61968 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 AL136984.1-201ENST00000607611 1893 ntBASIC5.29□□□□□ -1.56
LMO4P61968 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 OR2M1P-201ENST00000318104 951 ntBASIC5.29□□□□□ -1.56
LMO4P61968 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.29□□□□□ -1.56
LMO4P61968 SNORA77.2-201ENST00000408571 112 ntBASIC5.29□□□□□ -1.56
LMO4P61968 AL139415.1-201ENST00000424862 352 ntBASIC5.29□□□□□ -1.56
LMO4P61968 NPM1P25-201ENST00000429734 854 ntBASIC5.29□□□□□ -1.56
LMO4P61968 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.29□□□□□ -1.56
LMO4P61968 PNKDP1-201ENST00000435914 430 ntBASIC5.29□□□□□ -1.56
LMO4P61968 SOCS5P1-201ENST00000440415 949 ntBASIC5.29□□□□□ -1.56
LMO4P61968 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.29□□□□□ -1.56
LMO4P61968 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.29□□□□□ -1.56
LMO4P61968 NDUFA5P5-201ENST00000468361 342 ntBASIC5.29□□□□□ -1.56
LMO4P61968 RPL12P24-201ENST00000474907 486 ntBASIC5.29□□□□□ -1.56
LMO4P61968 RN7SL369P-201ENST00000477138 299 ntBASIC5.29□□□□□ -1.56
LMO4P61968 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
LMO4P61968 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.29□□□□□ -1.56
LMO4P61968 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.29□□□□□ -1.56
LMO4P61968 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.29□□□□□ -1.56
LMO4P61968 SNX18P24-201ENST00000505249 671 ntBASIC5.29□□□□□ -1.56
LMO4P61968 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.29□□□□□ -1.56
LMO4P61968 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.29□□□□□ -1.56
LMO4P61968 AC015818.6-201ENST00000584274 634 ntBASIC5.29□□□□□ -1.56
LMO4P61968 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.29□□□□□ -1.56
LMO4P61968 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.29□□□□□ -1.56
LMO4P61968 AC005332.4-201ENST00000592752 579 ntBASIC5.29□□□□□ -1.56
LMO4P61968 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.29□□□□□ -1.56
LMO4P61968 AL953862.2-201ENST00000603089 820 ntBASIC5.29□□□□□ -1.56
LMO4P61968 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC5.29□□□□□ -1.56
LMO4P61968 AP001437.1-201ENST00000608783 456 ntBASIC5.29□□□□□ -1.56
LMO4P61968 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LMO4P61968 AC002044.3-201ENST00000623314 541 ntBASIC5.29□□□□□ -1.56
LMO4P61968 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.29□□□□□ -1.56
LMO4P61968 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC5.29□□□□□ -1.56
LMO4P61968 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms