Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 H3F3AP3-201ENST00000497682 407 ntBASIC6.81□□□□□ -1.32
APOEP02649 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
APOEP02649 AC131392.1-201ENST00000506490 633 ntBASIC6.81□□□□□ -1.32
APOEP02649 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.81□□□□□ -1.32
APOEP02649 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.81□□□□□ -1.32
APOEP02649 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.81□□□□□ -1.32
APOEP02649 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.81□□□□□ -1.32
APOEP02649 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.81□□□□□ -1.32
APOEP02649 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.81□□□□□ -1.32
APOEP02649 AC074141.1-201ENST00000588129 2995 ntBASIC6.81□□□□□ -1.32
APOEP02649 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.81□□□□□ -1.32
APOEP02649 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.81□□□□□ -1.32
APOEP02649 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.81□□□□□ -1.32
APOEP02649 AC068726.1-201ENST00000610993 341 ntBASIC6.81□□□□□ -1.32
APOEP02649 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.81□□□□□ -1.32
APOEP02649 AP003486.1-201ENST00000525716 3994 ntBASIC6.81□□□□□ -1.32
APOEP02649 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
APOEP02649 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
APOEP02649 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
APOEP02649 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
APOEP02649 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
APOEP02649 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
APOEP02649 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
APOEP02649 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.81□□□□□ -1.32
APOEP02649 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
APOEP02649 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
APOEP02649 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.8□□□□□ -1.32
APOEP02649 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
APOEP02649 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
APOEP02649 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
APOEP02649 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
APOEP02649 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
APOEP02649 SNORA64.3-201ENST00000365647 134 ntBASIC6.8□□□□□ -1.32
APOEP02649 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
APOEP02649 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
APOEP02649 VIM2P-201ENST00000402383 1294 ntBASIC6.8□□□□□ -1.32
APOEP02649 RPL5P20-201ENST00000403848 896 ntBASIC6.8□□□□□ -1.32
APOEP02649 RN7SKP146-201ENST00000410242 334 ntBASIC6.8□□□□□ -1.32
APOEP02649 RN7SKP221-201ENST00000410420 301 ntBASIC6.8□□□□□ -1.32
APOEP02649 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.8□□□□□ -1.32
APOEP02649 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
APOEP02649 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.8□□□□□ -1.32
APOEP02649 OR6R1P-201ENST00000431838 940 ntBASIC6.8□□□□□ -1.32
APOEP02649 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.8□□□□□ -1.32
APOEP02649 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.8□□□□□ -1.32
APOEP02649 AL020997.1-201ENST00000446554 349 ntBASIC6.8□□□□□ -1.32
APOEP02649 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.8□□□□□ -1.32
APOEP02649 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.8□□□□□ -1.32
APOEP02649 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.8□□□□□ -1.32
APOEP02649 BTG1P1-201ENST00000540396 508 ntBASIC6.8□□□□□ -1.32
APOEP02649 RPL3P13-201ENST00000550415 216 ntBASIC6.8□□□□□ -1.32
APOEP02649 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.8□□□□□ -1.32
APOEP02649 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.8□□□□□ -1.32
APOEP02649 AC025283.1-201ENST00000572039 734 ntBASIC6.8□□□□□ -1.32
APOEP02649 WBP1LP11-201ENST00000586141 328 ntBASIC6.8□□□□□ -1.32
APOEP02649 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.8□□□□□ -1.32
APOEP02649 AC004805.3-201ENST00000603178 310 ntBASIC6.8□□□□□ -1.32
APOEP02649 AL157899.1-201ENST00000604110 936 ntBASIC6.8□□□□□ -1.32
APOEP02649 AL589743.6-201ENST00000611025 117 ntBASIC6.8□□□□□ -1.32
APOEP02649 GAPDHP41-201ENST00000613707 975 ntBASIC6.8□□□□□ -1.32
APOEP02649 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
APOEP02649 AC005899.7-201ENST00000618199 588 ntBASIC6.8□□□□□ -1.32
APOEP02649 AC048341.3-201ENST00000619323 491 ntBASIC6.8□□□□□ -1.32
APOEP02649 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.8□□□□□ -1.32
APOEP02649 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
APOEP02649 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
APOEP02649 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
APOEP02649 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
APOEP02649 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
APOEP02649 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.8□□□□□ -1.32
APOEP02649 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
APOEP02649 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.8□□□□□ -1.32
APOEP02649 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.8□□□□□ -1.32
APOEP02649 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
APOEP02649 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
APOEP02649 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
APOEP02649 API5P1-201ENST00000424316 1510 ntBASIC6.8□□□□□ -1.32
APOEP02649 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
APOEP02649 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
APOEP02649 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.8□□□□□ -1.32
APOEP02649 AL731556.1-201ENST00000394628 3711 ntBASIC6.79□□□□□ -1.32
APOEP02649 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.79□□□□□ -1.32
APOEP02649 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 AC022034.1-201ENST00000512867 2156 ntBASIC6.79□□□□□ -1.32
APOEP02649 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.79□□□□□ -1.32
APOEP02649 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
APOEP02649 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.79□□□□□ -1.32
APOEP02649 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
APOEP02649 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.79□□□□□ -1.32
APOEP02649 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
APOEP02649 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
APOEP02649 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.79□□□□□ -1.32
APOEP02649 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms