Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
ALDH1A1P00352 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
ALDH1A1P00352 AC011195.2-201ENST00000583666 1486 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
ALDH1A1P00352 DDX10P2-201ENST00000417796 2614 ntBASIC8.83□□□□□ -1
ALDH1A1P00352 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC8.83□□□□□ -1
ALDH1A1P00352 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
ALDH1A1P00352 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC8.82□□□□□ -1
ALDH1A1P00352 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ALDH1A1P00352 LINC02436-202ENST00000509017 2186 ntTSL 1 (best) BASIC8.82□□□□□ -1
ALDH1A1P00352 FOXR2-201ENST00000339140 1926 ntAPPRIS P1 BASIC8.82□□□□□ -1
ALDH1A1P00352 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ALDH1A1P00352 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC8.82□□□□□ -1
ALDH1A1P00352 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
ALDH1A1P00352 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
ALDH1A1P00352 RNU12-2P-201ENST00000364789 156 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC8.82□□□□□ -1
ALDH1A1P00352 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
ALDH1A1P00352 RNU6-157P-201ENST00000383957 107 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 Y_RNA.535-201ENST00000384612 99 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC8.82□□□□□ -1
ALDH1A1P00352 RNU1-56P-201ENST00000391303 164 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 EEF1GP6-201ENST00000402309 905 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
ALDH1A1P00352 AL445183.3-201ENST00000414168 502 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 RPS7P9-201ENST00000414704 586 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 BTF3L4P3-201ENST00000418879 476 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 AF228730.4-201ENST00000421457 183 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 USP9YP18-201ENST00000425912 695 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 RNF19BPX-201ENST00000426224 625 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC8.82□□□□□ -1
ALDH1A1P00352 LARP1BP3-201ENST00000437229 869 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 RPL6P5-201ENST00000445678 828 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC8.82□□□□□ -1
ALDH1A1P00352 RN7SL233P-201ENST00000469988 277 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC8.82□□□□□ -1
ALDH1A1P00352 AC023424.2-201ENST00000493479 777 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC8.82□□□□□ -1
ALDH1A1P00352 AC106872.4-201ENST00000510050 523 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC8.82□□□□□ -1
ALDH1A1P00352 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC8.82□□□□□ -1
ALDH1A1P00352 AC138517.1-201ENST00000515724 568 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 RNU6-1153P-201ENST00000516760 105 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 C1GALT1P3-201ENST00000522049 819 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 AC107952.1-201ENST00000524200 376 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 AP000916.1-201ENST00000533869 835 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 AC006065.2-201ENST00000536978 211 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.82□□□□□ -1
ALDH1A1P00352 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC8.82□□□□□ -1
ALDH1A1P00352 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC8.82□□□□□ -1
ALDH1A1P00352 AC104229.1-201ENST00000561364 255 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC8.82□□□□□ -1
ALDH1A1P00352 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC8.82□□□□□ -1
ALDH1A1P00352 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC8.82□□□□□ -1
ALDH1A1P00352 RN7SL66P-201ENST00000582099 264 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 MIR4310-201ENST00000582950 57 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC8.82□□□□□ -1
ALDH1A1P00352 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC8.82□□□□□ -1
ALDH1A1P00352 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC8.82□□□□□ -1
ALDH1A1P00352 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC8.82□□□□□ -1
ALDH1A1P00352 AL049840.5-201ENST00000602827 552 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 AL162730.1-201ENST00000605734 292 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 AL354760.1-201ENST00000608357 643 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 AP005264.7-201ENST00000625003 745 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC8.82□□□□□ -1
ALDH1A1P00352 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.82□□□□□ -1
ALDH1A1P00352 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ALDH1A1P00352 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
ALDH1A1P00352 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.82□□□□□ -1
ALDH1A1P00352 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
ALDH1A1P00352 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.82□□□□□ -1
ALDH1A1P00352 AL136140.2-201ENST00000624717 1705 ntBASIC8.82□□□□□ -1
ALDH1A1P00352 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC8.82□□□□□ -1
ALDH1A1P00352 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
ALDH1A1P00352 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
ALDH1A1P00352 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC8.82□□□□□ -1
ALDH1A1P00352 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC8.82□□□□□ -1
ALDH1A1P00352 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.82□□□□□ -1
ALDH1A1P00352 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
ALDH1A1P00352 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
ALDH1A1P00352 AC007012.2-201ENST00000623206 1676 ntBASIC8.81□□□□□ -1
ALDH1A1P00352 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC8.81□□□□□ -1
ALDH1A1P00352 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC8.81□□□□□ -1
ALDH1A1P00352 CHODL-206ENST00000400135 2136 ntTSL 1 (best) BASIC8.81□□□□□ -1
ALDH1A1P00352 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
ALDH1A1P00352 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC8.81□□□□□ -1
ALDH1A1P00352 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
ALDH1A1P00352 LUCAT1-203ENST00000513626 2672 ntTSL 2 BASIC8.81□□□□□ -1
ALDH1A1P00352 AC008537.3-201ENST00000623128 1881 ntBASIC8.81□□□□□ -1
ALDH1A1P00352 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC8.81□□□□□ -1
ALDH1A1P00352 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC8.81□□□□□ -1
ALDH1A1P00352 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC8.81□□□□□ -1
ALDH1A1P00352 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
ALDH1A1P00352 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
ALDH1A1P00352 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC8.81□□□□□ -1
ALDH1A1P00352 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
ALDH1A1P00352 GJA5-202ENST00000579774 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
ALDH1A1P00352 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC8.81□□□□□ -1
ALDH1A1P00352 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC8.81□□□□□ -1
ALDH1A1P00352 SNORD116.1-201ENST00000365628 92 ntBASIC8.81□□□□□ -1
ALDH1A1P00352 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms