RNA–Protein interactions for RNA: ENST00000425912.1

USP9YP18-201, Transcript of USP9Y pseudogene 18, humanhuman

BASIC

Gene USP9YP18, Length 695 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP18-201ENST00000425912 AEBP2Q6ZN18 517 aaPredicted RBP24.23■■□□□ 1.47
USP9YP18-201ENST00000425912 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
USP9YP18-201ENST00000425912 SENP3Q9H4L4 574 aaPredicted RBP20.54■□□□□ 0.88
USP9YP18-201ENST00000425912 PHF23Q9BUL5 403 aaPredicted RBP20.38■□□□□ 0.85
USP9YP18-201ENST00000425912 FOXD1Q16676 465 aa19.19■□□□□ 0.66
USP9YP18-201ENST00000425912 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
USP9YP18-201ENST00000425912 PPP6R1Q9UPN7 881 aa18.16■□□□□ 0.5
USP9YP18-201ENST00000425912 ADRA2BP18089 450 aa18.11■□□□□ 0.49
USP9YP18-201ENST00000425912 PIAS4Q8N2W9 510 aaPredicted RBP17.97■□□□□ 0.47
USP9YP18-201ENST00000425912 MSH5O43196 834 aa17.79■□□□□ 0.44
USP9YP18-201ENST00000425912 POTEDQ86YR6 584 aa17.07■□□□□ 0.32
USP9YP18-201ENST00000425912 MAPK8IP2Q13387 824 aaPredicted RBP16.59■□□□□ 0.25
USP9YP18-201ENST00000425912 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
USP9YP18-201ENST00000425912 PPP4R3CPQ6ZMV5 832 aa16.35■□□□□ 0.21
USP9YP18-201ENST00000425912 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
USP9YP18-201ENST00000425912 CNKSR2Q8WXI2 1034 aa15.95■□□□□ 0.14
USP9YP18-201ENST00000425912 HOXD11P31277 338 aaPredicted RBP15.82■□□□□ 0.12
USP9YP18-201ENST00000425912 RNF216Q9NWF9 866 aaPredicted RBP15.75■□□□□ 0.11
USP9YP18-201ENST00000425912 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
USP9YP18-201ENST00000425912 DCAF8L1A6NGE4 600 aa15.71■□□□□ 0.11
USP9YP18-201ENST00000425912 NPM3O75607 178 aaKnown RBP15.57■□□□□ 0.08
USP9YP18-201ENST00000425912 KCNA4P22459 653 aa15.5■□□□□ 0.07
USP9YP18-201ENST00000425912 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
USP9YP18-201ENST00000425912 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
USP9YP18-201ENST00000425912 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
USP9YP18-201ENST00000425912 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.09■□□□□ 0.01
USP9YP18-201ENST00000425912 C1QBPQ07021 282 aaKnown RBP15□□□□□ -0.01
USP9YP18-201ENST00000425912 SLC4A2P04920 1241 aa14.84□□□□□ -0.03
USP9YP18-201ENST00000425912 U3KPZ7 1027 aaPredicted RBP14.82□□□□□ -0.04
USP9YP18-201ENST00000425912 SLC4A1APQ9BWU0 796 aaKnown RBP14.63□□□□□ -0.07
USP9YP18-201ENST00000425912 SPINK5Q9NQ38 1064 aaPredicted RBP14.58□□□□□ -0.08
USP9YP18-201ENST00000425912 CAPN15O75808 1086 aa14.5□□□□□ -0.09
USP9YP18-201ENST00000425912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.37□□□□□ -0.11
USP9YP18-201ENST00000425912 HNRNPUL2Q1KMD3 747 aaKnown RBP14.37□□□□□ -0.11
USP9YP18-201ENST00000425912 DSG3P32926 999 aa14.36□□□□□ -0.11
USP9YP18-201ENST00000425912 MYCNP04198 464 aaPredicted RBP14.34□□□□□ -0.11
USP9YP18-201ENST00000425912 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
USP9YP18-201ENST00000425912 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
USP9YP18-201ENST00000425912 FOXD4L1Q9NU39 408 aa14.32□□□□□ -0.12
USP9YP18-201ENST00000425912 APLP2Q06481 763 aa14.3□□□□□ -0.12
USP9YP18-201ENST00000425912 ZBTB22O15209 634 aa14.27□□□□□ -0.13
USP9YP18-201ENST00000425912 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
USP9YP18-201ENST00000425912 ABCB7O75027 752 aa14.22□□□□□ -0.13
USP9YP18-201ENST00000425912 ATF5Q9Y2D1 282 aaPredicted RBP14.1□□□□□ -0.15
USP9YP18-201ENST00000425912 POLA2Q14181 598 aa14.01□□□□□ -0.17
USP9YP18-201ENST00000425912 ATXN8OSP0DMR3 200 aa13.82□□□□□ -0.2
USP9YP18-201ENST00000425912 CSRNP3Q8WYN3 585 aa13.79□□□□□ -0.2
USP9YP18-201ENST00000425912 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
USP9YP18-201ENST00000425912 ZBTB12Q9Y330 459 aaPredicted RBP13.63□□□□□ -0.23
USP9YP18-201ENST00000425912 RBM42Q9BTD8 480 aaKnown RBP13.62□□□□□ -0.23
USP9YP18-201ENST00000425912 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
USP9YP18-201ENST00000425912 MKRN4PQ13434 485 aaPredicted RBP13.44□□□□□ -0.26
USP9YP18-201ENST00000425912 FBLN2P98095 1184 aa13.42□□□□□ -0.26
USP9YP18-201ENST00000425912 POTEHQ6S545 545 aa13.41□□□□□ -0.26
USP9YP18-201ENST00000425912 AKT1S1Q96B36 256 aa13.38□□□□□ -0.27
USP9YP18-201ENST00000425912 CHRDL2Q6WN34 429 aa13.31□□□□□ -0.28
USP9YP18-201ENST00000425912 REM2Q8IYK8 340 aaPredicted RBP13.3□□□□□ -0.28
USP9YP18-201ENST00000425912 SPDYE2BA6NHP3 402 aa13.26□□□□□ -0.29
USP9YP18-201ENST00000425912 SPDYE6P0CI01 402 aa13.26□□□□□ -0.29
USP9YP18-201ENST00000425912 SPDYE2Q495Y8 402 aa13.26□□□□□ -0.29
USP9YP18-201ENST00000425912 ZNF692Q9BU19 519 aaPredicted RBP13.19□□□□□ -0.3
USP9YP18-201ENST00000425912 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
USP9YP18-201ENST00000425912 SSUH2Q9Y2M2 353 aa13.13□□□□□ -0.31
USP9YP18-201ENST00000425912 PIP4P2Q8N4L2 257 aa13.05□□□□□ -0.32
USP9YP18-201ENST00000425912 PABPN1Q86U42 306 aaKnown RBP eCLIP13.01□□□□□ -0.33
USP9YP18-201ENST00000425912 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
USP9YP18-201ENST00000425912 FXR2P51116 673 aaKnown RBP eCLIP12.98□□□□□ -0.33
USP9YP18-201ENST00000425912 SPDYE1Q8NFV5 336 aaPredicted RBP12.98□□□□□ -0.33
USP9YP18-201ENST00000425912 SPDYE4A6NLX3 237 aa12.88□□□□□ -0.35
USP9YP18-201ENST00000425912 PRKAR2AP13861 404 aaKnown RBP12.82□□□□□ -0.36
USP9YP18-201ENST00000425912 PRR29P0C7W0 189 aa12.8□□□□□ -0.36
USP9YP18-201ENST00000425912 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
USP9YP18-201ENST00000425912 HAX1O00165 279 aa12.76□□□□□ -0.37
USP9YP18-201ENST00000425912 EVX2Q03828 476 aa12.68□□□□□ -0.38
USP9YP18-201ENST00000425912 SP7Q8TDD2 431 aaPredicted RBP12.66□□□□□ -0.38
USP9YP18-201ENST00000425912 STAG3Q9UJ98 1225 aa12.62□□□□□ -0.39
USP9YP18-201ENST00000425912 PROM2Q8N271 834 aa12.58□□□□□ -0.4
USP9YP18-201ENST00000425912 C19orf67A6NJJ6 358 aa12.56□□□□□ -0.4
USP9YP18-201ENST00000425912 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
USP9YP18-201ENST00000425912 CREBZFQ9NS37 354 aa12.55□□□□□ -0.4
USP9YP18-201ENST00000425912 FKBP8Q14318 412 aa12.48□□□□□ -0.41
USP9YP18-201ENST00000425912 CD44P16070 742 aaKnown RBP12.42□□□□□ -0.42
USP9YP18-201ENST00000425912 MNX1P50219 401 aaPredicted RBP12.38□□□□□ -0.43
USP9YP18-201ENST00000425912 GABBR2O75899 941 aa12.35□□□□□ -0.43
USP9YP18-201ENST00000425912 ZRANB1Q9UGI0 708 aa12.29□□□□□ -0.44
USP9YP18-201ENST00000425912 MIER1Q8N108 512 aa12.28□□□□□ -0.44
USP9YP18-201ENST00000425912 NPM1P06748 294 aaKnown RBP eCLIP12.26□□□□□ -0.45
USP9YP18-201ENST00000425912 ZNF579Q8NAF0 562 aaKnown RBP12.21□□□□□ -0.45
USP9YP18-201ENST00000425912 PLCD3Q8N3E9 789 aa12.19□□□□□ -0.46
USP9YP18-201ENST00000425912 PAK3O75914 559 aaPredicted RBP12.17□□□□□ -0.46
USP9YP18-201ENST00000425912 PLEKHG5O94827 1062 aa12.16□□□□□ -0.46
USP9YP18-201ENST00000425912 PHF12Q96QT6 1004 aa12.16□□□□□ -0.46
USP9YP18-201ENST00000425912 TSPYL2Q9H2G4 693 aaPredicted RBP12.13□□□□□ -0.47
USP9YP18-201ENST00000425912 POTEIP0CG38 1075 aa12.12□□□□□ -0.47
USP9YP18-201ENST00000425912 GALR2O43603 387 aaPredicted RBP12.11□□□□□ -0.47
USP9YP18-201ENST00000425912 CLCN6P51797 869 aa12.1□□□□□ -0.47
USP9YP18-201ENST00000425912 RASEFQ8IZ41 740 aa12.08□□□□□ -0.48
USP9YP18-201ENST00000425912 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
USP9YP18-201ENST00000425912 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
USP9YP18-201ENST00000425912 CCDC61Q9Y6R9 512 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms