Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC018816.2-201ENST00000621460 353 ntBASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AQP4-208ENST00000622234 891 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 TRIM37-214ENST00000625984 204 ntTSL 5 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 SMG7-216ENST00000638826 219 ntTSL 2 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 MITF-202ENST00000314589 1993 ntTSL 2 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 U3.34-201ENST00000408198 212 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 TMSB10P1-201ENST00000415070 132 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AL357632.1-201ENST00000426688 643 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AC006450.2-201ENST00000429482 581 ntTSL 2 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AL445686.1-201ENST00000443086 348 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 RFC5P1-201ENST00000454419 874 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 IGLVI-68-201ENST00000519525 345 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AC091175.1-201ENST00000522168 572 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 SNRPCP14-201ENST00000524498 205 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AP000619.1-201ENST00000540293 1000 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AC093012.1-202ENST00000549403 582 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 PSMA3P-201ENST00000555485 635 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 HERC2P5-201ENST00000562687 3825 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 CD209-208ENST00000593821 807 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AL109806.1-201ENST00000623967 1248 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 ATE1-AS1-202ENST00000636460 506 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 MFSD8-245ENST00000641743 948 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 RNASEH2B-AS1-209ENST00000631080 1707 ntTSL 5 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 RTP3-201ENST00000296142 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 SSXP3-201ENST00000442971 1300 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 KARSP1-201ENST00000451871 1752 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 LRRC37A6P-202ENST00000448648 5444 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AC098657.2-201ENST00000567886 1976 ntBASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
SCUBE3Q8IX30 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SCUBE3Q8IX30 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SCUBE3Q8IX30 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SCUBE3Q8IX30 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SCUBE3Q8IX30 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SCUBE3Q8IX30 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SCUBE3Q8IX30 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC8.69□□□□□ -1.02
SCUBE3Q8IX30 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SCUBE3Q8IX30 IMPG1-204ENST00000611179 3324 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
SCUBE3Q8IX30 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SCUBE3Q8IX30 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms