RNA–Protein interactions for RNA: ENST00000555485.2

PSMA3P-201, Transcript of proteasome subunit alpha 3 pseudogene, humanhuman

BASIC

Gene PSMA3P, Length 635 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3P-201ENST00000555485 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
PSMA3P-201ENST00000555485 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
PSMA3P-201ENST00000555485 SENP3Q9H4L4 574 aaPredicted RBP20.61■□□□□ 0.89
PSMA3P-201ENST00000555485 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
PSMA3P-201ENST00000555485 FOXD1Q16676 465 aa19.25■□□□□ 0.67
PSMA3P-201ENST00000555485 POTEDQ86YR6 584 aa18.22■□□□□ 0.51
PSMA3P-201ENST00000555485 MSH5O43196 834 aa18.13■□□□□ 0.49
PSMA3P-201ENST00000555485 PIAS4Q8N2W9 510 aaPredicted RBP17.94■□□□□ 0.46
PSMA3P-201ENST00000555485 PLPPR3Q6T4P5 718 aa17.92■□□□□ 0.46
PSMA3P-201ENST00000555485 PPP6R1Q9UPN7 881 aa17.77■□□□□ 0.44
PSMA3P-201ENST00000555485 ADRA2BP18089 450 aa17.71■□□□□ 0.43
PSMA3P-201ENST00000555485 MAPK8IP2Q13387 824 aaPredicted RBP16.36■□□□□ 0.21
PSMA3P-201ENST00000555485 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
PSMA3P-201ENST00000555485 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
PSMA3P-201ENST00000555485 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
PSMA3P-201ENST00000555485 DCAF8L1A6NGE4 600 aa15.71■□□□□ 0.11
PSMA3P-201ENST00000555485 PPP4R3CPQ6ZMV5 832 aa15.68■□□□□ 0.1
PSMA3P-201ENST00000555485 HOXD11P31277 338 aaPredicted RBP15.56■□□□□ 0.08
PSMA3P-201ENST00000555485 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
PSMA3P-201ENST00000555485 RNF39Q9H2S5 420 aa15.44■□□□□ 0.06
PSMA3P-201ENST00000555485 RNF216Q9NWF9 866 aaPredicted RBP15.38■□□□□ 0.05
PSMA3P-201ENST00000555485 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
PSMA3P-201ENST00000555485 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
PSMA3P-201ENST00000555485 NCBP3Q53F19 620 aaKnown RBP14.98□□□□□ -0.01
PSMA3P-201ENST00000555485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.88□□□□□ -0.03
PSMA3P-201ENST00000555485 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
PSMA3P-201ENST00000555485 U3KPZ7 1027 aaPredicted RBP14.51□□□□□ -0.09
PSMA3P-201ENST00000555485 CAPN15O75808 1086 aa14.41□□□□□ -0.1
PSMA3P-201ENST00000555485 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
PSMA3P-201ENST00000555485 DSG3P32926 999 aa14.36□□□□□ -0.11
PSMA3P-201ENST00000555485 POTEHQ6S545 545 aa14.23□□□□□ -0.13
PSMA3P-201ENST00000555485 KCNA4P22459 653 aa14.22□□□□□ -0.13
PSMA3P-201ENST00000555485 SLC4A2P04920 1241 aa14.17□□□□□ -0.14
PSMA3P-201ENST00000555485 TRHP20396 242 aaPredicted RBP14.12□□□□□ -0.15
PSMA3P-201ENST00000555485 APLP2Q06481 763 aa14.07□□□□□ -0.16
PSMA3P-201ENST00000555485 ABCB7O75027 752 aa14.06□□□□□ -0.16
PSMA3P-201ENST00000555485 ZNF219Q9P2Y4 722 aaPredicted RBP14.04□□□□□ -0.16
PSMA3P-201ENST00000555485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.99□□□□□ -0.17
PSMA3P-201ENST00000555485 HNRNPUL2Q1KMD3 747 aaKnown RBP13.99□□□□□ -0.17
PSMA3P-201ENST00000555485 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
PSMA3P-201ENST00000555485 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
PSMA3P-201ENST00000555485 MYCNP04198 464 aaPredicted RBP13.66□□□□□ -0.22
PSMA3P-201ENST00000555485 POLA2Q14181 598 aa13.65□□□□□ -0.22
PSMA3P-201ENST00000555485 CHRDL2Q6WN34 429 aa13.55□□□□□ -0.24
PSMA3P-201ENST00000555485 ATF5Q9Y2D1 282 aaPredicted RBP13.38□□□□□ -0.27
PSMA3P-201ENST00000555485 SLC4A1APQ9BWU0 796 aaKnown RBP13.37□□□□□ -0.27
PSMA3P-201ENST00000555485 FOXD4L1Q9NU39 408 aa13.36□□□□□ -0.27
PSMA3P-201ENST00000555485 AKT1S1Q96B36 256 aa13.32□□□□□ -0.28
PSMA3P-201ENST00000555485 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
PSMA3P-201ENST00000555485 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
PSMA3P-201ENST00000555485 REM2Q8IYK8 340 aaPredicted RBP13.22□□□□□ -0.29
PSMA3P-201ENST00000555485 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
PSMA3P-201ENST00000555485 PIP4P2Q8N4L2 257 aa13.16□□□□□ -0.3
PSMA3P-201ENST00000555485 PITPNM1O00562 1244 aa13.09□□□□□ -0.31
PSMA3P-201ENST00000555485 ZBTB22O15209 634 aa13.06□□□□□ -0.32
PSMA3P-201ENST00000555485 HAX1O00165 279 aa13.03□□□□□ -0.32
PSMA3P-201ENST00000555485 FXR2P51116 673 aaKnown RBP eCLIP13.01□□□□□ -0.33
PSMA3P-201ENST00000555485 ATXN8OSP0DMR3 200 aa12.95□□□□□ -0.34
PSMA3P-201ENST00000555485 FBLN2P98095 1184 aa12.89□□□□□ -0.35
PSMA3P-201ENST00000555485 SPDYE2BA6NHP3 402 aa12.88□□□□□ -0.35
PSMA3P-201ENST00000555485 SPDYE6P0CI01 402 aa12.88□□□□□ -0.35
PSMA3P-201ENST00000555485 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
PSMA3P-201ENST00000555485 EVX2Q03828 476 aa12.82□□□□□ -0.36
PSMA3P-201ENST00000555485 CLEC11AQ9Y240 323 aa12.78□□□□□ -0.36
PSMA3P-201ENST00000555485 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
PSMA3P-201ENST00000555485 SPDYE1Q8NFV5 336 aaPredicted RBP12.74□□□□□ -0.37
PSMA3P-201ENST00000555485 MKRN4PQ13434 485 aaPredicted RBP12.73□□□□□ -0.37
PSMA3P-201ENST00000555485 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
PSMA3P-201ENST00000555485 SSUH2Q9Y2M2 353 aa12.66□□□□□ -0.38
PSMA3P-201ENST00000555485 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
PSMA3P-201ENST00000555485 CHADLQ6NUI6 762 aa12.56□□□□□ -0.4
PSMA3P-201ENST00000555485 GABBR2O75899 941 aa12.52□□□□□ -0.41
PSMA3P-201ENST00000555485 PRR29P0C7W0 189 aa12.51□□□□□ -0.41
PSMA3P-201ENST00000555485 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
PSMA3P-201ENST00000555485 LHX8Q68G74 356 aa12.38□□□□□ -0.43
PSMA3P-201ENST00000555485 CD44P16070 742 aaKnown RBP12.33□□□□□ -0.44
PSMA3P-201ENST00000555485 FARP1Q9Y4F1 1045 aaPredicted RBP12.32□□□□□ -0.44
PSMA3P-201ENST00000555485 POTEIP0CG38 1075 aa12.23□□□□□ -0.45
PSMA3P-201ENST00000555485 CSRNP3Q8WYN3 585 aa12.18□□□□□ -0.46
PSMA3P-201ENST00000555485 CLCN6P51797 869 aa12.17□□□□□ -0.46
PSMA3P-201ENST00000555485 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
PSMA3P-201ENST00000555485 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
PSMA3P-201ENST00000555485 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
PSMA3P-201ENST00000555485 CREBZFQ9NS37 354 aa12.1□□□□□ -0.47
PSMA3P-201ENST00000555485 STAG3Q9UJ98 1225 aa12.08□□□□□ -0.48
PSMA3P-201ENST00000555485 SPDYE4A6NLX3 237 aa12□□□□□ -0.49
PSMA3P-201ENST00000555485 GALR2O43603 387 aaPredicted RBP12□□□□□ -0.49
PSMA3P-201ENST00000555485 PAK3O75914 559 aaPredicted RBP11.95□□□□□ -0.5
PSMA3P-201ENST00000555485 PHF12Q96QT6 1004 aa11.92□□□□□ -0.5
PSMA3P-201ENST00000555485 EHMT2Q96KQ7 1210 aa11.91□□□□□ -0.5
PSMA3P-201ENST00000555485 NPM1P06748 294 aaKnown RBP eCLIP11.88□□□□□ -0.51
PSMA3P-201ENST00000555485 PLSCR2Q9NRY7 297 aa11.88□□□□□ -0.51
PSMA3P-201ENST00000555485 OTUD5Q96G74 571 aa11.85□□□□□ -0.51
PSMA3P-201ENST00000555485 MNX1P50219 401 aaPredicted RBP11.84□□□□□ -0.51
PSMA3P-201ENST00000555485 POTEB2H3BUK9 544 aa11.83□□□□□ -0.52
PSMA3P-201ENST00000555485 PELP1Q8IZL8 1130 aaKnown RBP11.79□□□□□ -0.52
PSMA3P-201ENST00000555485 MS4A3Q96HJ5 214 aa11.74□□□□□ -0.53
PSMA3P-201ENST00000555485 ASTLQ6HA08 431 aaPredicted RBP11.7□□□□□ -0.54
PSMA3P-201ENST00000555485 METRNQ9UJH8 293 aa11.7□□□□□ -0.54
PSMA3P-201ENST00000555485 POTEMA6NI47 508 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms