RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 CHIC1Q5VXU3 224 aa20.03■□□□□ 0.8
LINC00400-201ENST00000425609 AEBP2Q6ZN18 517 aaPredicted RBP20.02■□□□□ 0.8
LINC00400-201ENST00000425609 PHF23Q9BUL5 403 aaPredicted RBP17.71■□□□□ 0.43
LINC00400-201ENST00000425609 SENP3Q9H4L4 574 aaPredicted RBP16.83■□□□□ 0.28
LINC00400-201ENST00000425609 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
LINC00400-201ENST00000425609 FOXD1Q16676 465 aa15.59■□□□□ 0.09
LINC00400-201ENST00000425609 ADRA2BP18089 450 aa15.46■□□□□ 0.07
LINC00400-201ENST00000425609 PPP6R1Q9UPN7 881 aa15.44■□□□□ 0.06
LINC00400-201ENST00000425609 KCNA4P22459 653 aa14.88□□□□□ -0.03
LINC00400-201ENST00000425609 PIAS4Q8N2W9 510 aaPredicted RBP14.79□□□□□ -0.04
LINC00400-201ENST00000425609 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
LINC00400-201ENST00000425609 EHMT2Q96KQ7 1210 aa14.42□□□□□ -0.1
LINC00400-201ENST00000425609 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
LINC00400-201ENST00000425609 SLC4A1APQ9BWU0 796 aaKnown RBP14.22□□□□□ -0.13
LINC00400-201ENST00000425609 NPM3O75607 178 aaKnown RBP14.18□□□□□ -0.14
LINC00400-201ENST00000425609 MSH5O43196 834 aa14.13□□□□□ -0.15
LINC00400-201ENST00000425609 CSRNP3Q8WYN3 585 aa14.07□□□□□ -0.16
LINC00400-201ENST00000425609 CNKSR2Q8WXI2 1034 aa14.06□□□□□ -0.16
LINC00400-201ENST00000425609 SCAF1Q9H7N4 1312 aaKnown RBP14.03□□□□□ -0.16
LINC00400-201ENST00000425609 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
LINC00400-201ENST00000425609 ZBTB22O15209 634 aa13.74□□□□□ -0.21
LINC00400-201ENST00000425609 POTEDQ86YR6 584 aa13.74□□□□□ -0.21
LINC00400-201ENST00000425609 DNAJC5BQ9UF47 199 aa13.74□□□□□ -0.21
LINC00400-201ENST00000425609 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
LINC00400-201ENST00000425609 DMRT2Q9Y5R5 561 aa13.55□□□□□ -0.24
LINC00400-201ENST00000425609 FOXD4L1Q9NU39 408 aa13.52□□□□□ -0.25
LINC00400-201ENST00000425609 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
LINC00400-201ENST00000425609 SLC4A2P04920 1241 aa13.28□□□□□ -0.28
LINC00400-201ENST00000425609 MYCNP04198 464 aaPredicted RBP13.06□□□□□ -0.32
LINC00400-201ENST00000425609 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
LINC00400-201ENST00000425609 DCAF8L1A6NGE4 600 aa12.84□□□□□ -0.35
LINC00400-201ENST00000425609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC00400-201ENST00000425609 ATF5Q9Y2D1 282 aaPredicted RBP12.72□□□□□ -0.37
LINC00400-201ENST00000425609 U3KPZ7 1027 aaPredicted RBP12.71□□□□□ -0.37
LINC00400-201ENST00000425609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.65□□□□□ -0.38
LINC00400-201ENST00000425609 HNRNPUL2Q1KMD3 747 aaKnown RBP12.65□□□□□ -0.38
LINC00400-201ENST00000425609 SAMD1Q6SPF0 538 aaPredicted RBP12.64□□□□□ -0.39
LINC00400-201ENST00000425609 FKBP8Q14318 412 aa12.63□□□□□ -0.39
LINC00400-201ENST00000425609 RTN4Q9NQC3 1192 aaKnown RBP12.46□□□□□ -0.41
LINC00400-201ENST00000425609 AMER1Q5JTC6 1135 aaPredicted RBP12.44□□□□□ -0.42
LINC00400-201ENST00000425609 ZNF219Q9P2Y4 722 aaPredicted RBP12.4□□□□□ -0.42
LINC00400-201ENST00000425609 APLP2Q06481 763 aa12.37□□□□□ -0.43
LINC00400-201ENST00000425609 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
LINC00400-201ENST00000425609 RNF39Q9H2S5 420 aa12.2□□□□□ -0.46
LINC00400-201ENST00000425609 SPINK5Q9NQ38 1064 aaPredicted RBP12.18□□□□□ -0.46
LINC00400-201ENST00000425609 SPDYE4A6NLX3 237 aa12.12□□□□□ -0.47
LINC00400-201ENST00000425609 TRHP20396 242 aaPredicted RBP12.12□□□□□ -0.47
LINC00400-201ENST00000425609 SLC24A1O60721 1099 aa12.09□□□□□ -0.47
LINC00400-201ENST00000425609 PROM2Q8N271 834 aa12.08□□□□□ -0.48
LINC00400-201ENST00000425609 POLA2Q14181 598 aa12.07□□□□□ -0.48
LINC00400-201ENST00000425609 FBLN2P98095 1184 aa12.05□□□□□ -0.48
LINC00400-201ENST00000425609 C1QBPQ07021 282 aaKnown RBP12.05□□□□□ -0.48
LINC00400-201ENST00000425609 CAPN15O75808 1086 aa12.04□□□□□ -0.48
LINC00400-201ENST00000425609 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
LINC00400-201ENST00000425609 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
LINC00400-201ENST00000425609 ABCB7O75027 752 aa11.89□□□□□ -0.51
LINC00400-201ENST00000425609 VASPP50552 380 aaPredicted RBP11.88□□□□□ -0.51
LINC00400-201ENST00000425609 DSG3P32926 999 aa11.78□□□□□ -0.52
LINC00400-201ENST00000425609 IFNLR1Q8IU57 520 aaPredicted RBP11.78□□□□□ -0.52
LINC00400-201ENST00000425609 CACNB1Q02641 598 aaPredicted RBP11.77□□□□□ -0.53
LINC00400-201ENST00000425609 OSCARQ8IYS5 282 aa11.66□□□□□ -0.54
LINC00400-201ENST00000425609 ZNF692Q9BU19 519 aaPredicted RBP11.65□□□□□ -0.54
LINC00400-201ENST00000425609 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
LINC00400-201ENST00000425609 SPDYE2BA6NHP3 402 aa11.64□□□□□ -0.55
LINC00400-201ENST00000425609 SPDYE6P0CI01 402 aa11.64□□□□□ -0.55
LINC00400-201ENST00000425609 SPDYE2Q495Y8 402 aa11.64□□□□□ -0.55
LINC00400-201ENST00000425609 PKD2Q13563 968 aa11.6□□□□□ -0.55
LINC00400-201ENST00000425609 STAG3Q9UJ98 1225 aa11.55□□□□□ -0.56
LINC00400-201ENST00000425609 PABPN1Q86U42 306 aaKnown RBP eCLIP11.53□□□□□ -0.56
LINC00400-201ENST00000425609 PLCB2Q00722 1185 aa11.5□□□□□ -0.57
LINC00400-201ENST00000425609 SPOCK2Q92563 424 aa11.5□□□□□ -0.57
LINC00400-201ENST00000425609 KLHL34Q8N239 644 aa11.47□□□□□ -0.57
LINC00400-201ENST00000425609 PLCD3Q8N3E9 789 aa11.43□□□□□ -0.58
LINC00400-201ENST00000425609 DCAF8L2P0C7V8 631 aa11.42□□□□□ -0.58
LINC00400-201ENST00000425609 MIER1Q8N108 512 aa11.39□□□□□ -0.59
LINC00400-201ENST00000425609 ECM2O94769 699 aaPredicted RBP11.37□□□□□ -0.59
LINC00400-201ENST00000425609 RGL2O15211 777 aa11.29□□□□□ -0.6
LINC00400-201ENST00000425609 HAP1P54257 671 aaPredicted RBP11.29□□□□□ -0.6
LINC00400-201ENST00000425609 NPM1P06748 294 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC00400-201ENST00000425609 ZBTB47Q9UFB7 747 aaPredicted RBP11.27□□□□□ -0.61
LINC00400-201ENST00000425609 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
LINC00400-201ENST00000425609 BBXQ8WY36 941 aaPredicted RBP11.25□□□□□ -0.61
LINC00400-201ENST00000425609 CIZ1Q9ULV3 898 aaPredicted RBP11.2□□□□□ -0.62
LINC00400-201ENST00000425609 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.18□□□□□ -0.62
LINC00400-201ENST00000425609 VSIG10Q8N0Z9 540 aa11.16□□□□□ -0.62
LINC00400-201ENST00000425609 AKT1S1Q96B36 256 aa11.16□□□□□ -0.62
LINC00400-201ENST00000425609 RBM42Q9BTD8 480 aaKnown RBP11.16□□□□□ -0.62
LINC00400-201ENST00000425609 SPDYE1Q8NFV5 336 aaPredicted RBP11.15□□□□□ -0.62
LINC00400-201ENST00000425609 TRIM41Q8WV44 630 aa11.15□□□□□ -0.62
LINC00400-201ENST00000425609 NUBP1P53384 320 aa11.13□□□□□ -0.63
LINC00400-201ENST00000425609 PAXIP1Q6ZW49 1069 aaPredicted RBP11.13□□□□□ -0.63
LINC00400-201ENST00000425609 CFAP44Q96MT7 982 aa11.09□□□□□ -0.63
LINC00400-201ENST00000425609 GSE1Q14687 1217 aa11.08□□□□□ -0.64
LINC00400-201ENST00000425609 RNF25Q96BH1 459 aaPredicted RBP11.08□□□□□ -0.64
LINC00400-201ENST00000425609 CREBZFQ9NS37 354 aa11.08□□□□□ -0.64
LINC00400-201ENST00000425609 CHGAP10645 457 aaKnown RBP11.07□□□□□ -0.64
LINC00400-201ENST00000425609 MNX1P50219 401 aaPredicted RBP11.07□□□□□ -0.64
LINC00400-201ENST00000425609 REM2Q8IYK8 340 aaPredicted RBP11.06□□□□□ -0.64
LINC00400-201ENST00000425609 KDM2AQ9Y2K7 1162 aa11.06□□□□□ -0.64
LINC00400-201ENST00000425609 SPRYD3Q8NCJ5 442 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms