Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 PSG11-202ENST00000320078 1575 ntAPPRIS P2 TSL 2 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 LINC02363-201ENST00000317596 2153 ntTSL 2 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 DENND2A-208ENST00000492720 3614 ntTSL 5 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 CERS3-201ENST00000284382 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 ZNF432-201ENST00000221315 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 FASTKD2-202ENST00000402774 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 KAT14-206ENST00000489634 3152 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 TMSB4XP2-201ENST00000335179 210 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 TAGAP-202ENST00000338313 1183 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 OR51D1-201ENST00000357605 1124 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 LINC02271-201ENST00000398777 546 ntTSL 4 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC015977.2-201ENST00000420852 567 ntTSL 3 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC093084.1-201ENST00000424233 687 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 USP9YP36-201ENST00000424581 829 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC009501.2-201ENST00000428700 312 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 TRMT112P4-201ENST00000429016 379 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AL353093.1-201ENST00000441292 436 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 MDC1-AS1-201ENST00000442150 738 ntTSL 3 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AL109933.1-201ENST00000448126 292 ntTSL 5 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC006159.1-201ENST00000452009 386 ntTSL 5 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 SOX2-OT-202ENST00000461063 566 ntTSL 3 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 CENPS-202ENST00000462462 584 ntTSL 3 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC130509.1-201ENST00000464158 433 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 PTPRE-207ENST00000471218 522 ntTSL 3 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AL590867.2-201ENST00000492974 447 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC100860.1-201ENST00000517606 1064 ntTSL 4 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AP003034.1-201ENST00000534621 422 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC083805.2-201ENST00000549683 610 ntTSL 2 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC060814.2-201ENST00000556905 1089 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC018554.2-201ENST00000563482 261 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 FRG2GP-201ENST00000567870 615 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 MIR3650-201ENST00000581972 60 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 H3F3BP2-201ENST00000583907 357 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AL133215.3-201ENST00000609801 448 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC005332.6-201ENST00000613178 446 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 Metazoa_SRP.20-201ENST00000619896 275 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 AC134503.1-201ENST00000633048 54 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 CHEK2-206ENST00000402731 1545 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 PDE4D-207ENST00000405755 2294 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 OR2B11-203ENST00000641527 4545 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 ERG-210ENST00000442448 5034 ntTSL 5 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 MEST-203ENST00000378576 2180 ntTSL 5 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 PABPC1P12-201ENST00000428454 2175 ntBASIC8.01□□□□□ -1.13
USB1Q9BQ65 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 ADIPOQ-AS1-201ENST00000422718 3443 ntTSL 5 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 GLT8D2-202ENST00000546436 1578 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 ELF4-204ENST00000615377 3878 ntTSL 5 BASIC8.01□□□□□ -1.13
USB1Q9BQ65 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 OVGP1-201ENST00000369732 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USB1Q9BQ65 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms