Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 SNORA75.4-201ENST00000391278 119 ntBASIC9.03□□□□□ -0.96
LRCH3Q96II8 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 SNX18P14-201ENST00000429308 574 ntBASIC9.03□□□□□ -0.96
LRCH3Q96II8 AL138899.2-201ENST00000439139 499 ntBASIC9.03□□□□□ -0.96
LRCH3Q96II8 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 AL592437.1-201ENST00000443781 492 ntBASIC9.03□□□□□ -0.96
LRCH3Q96II8 AC010878.1-201ENST00000456500 1047 ntBASIC9.03□□□□□ -0.96
LRCH3Q96II8 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 AC119424.1-201ENST00000472513 350 ntTSL 5 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 PGBD4P1-201ENST00000473644 407 ntBASIC9.03□□□□□ -0.96
LRCH3Q96II8 AC096743.1-201ENST00000485172 319 ntBASIC9.03□□□□□ -0.96
LRCH3Q96II8 LINC01411-202ENST00000506862 744 ntTSL 3 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 AC010608.1-201ENST00000507964 275 ntTSL 4 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 IGHV3-32-201ENST00000519182 355 ntBASIC9.03□□□□□ -0.96
LRCH3Q96II8 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 AF235103.2-201ENST00000525753 346 ntBASIC9.03□□□□□ -0.96
LRCH3Q96II8 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 AC078962.3-201ENST00000545821 482 ntTSL 5 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 AC013452.1-201ENST00000560630 598 ntBASIC9.03□□□□□ -0.96
LRCH3Q96II8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 MIR4642-201ENST00000583943 82 ntBASIC9.03□□□□□ -0.96
LRCH3Q96II8 RPL27-207ENST00000590864 569 ntTSL 2 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 EDRF1-AS1-202ENST00000593871 592 ntTSL 5 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 AL391903.2-201ENST00000614532 247 ntBASIC9.03□□□□□ -0.96
LRCH3Q96II8 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 IBSP-201ENST00000226284 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 CYB561A3-221ENST00000546151 3986 ntTSL 3 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 AC000367.1-201ENST00000452711 1766 ntBASIC9.03□□□□□ -0.96
LRCH3Q96II8 CCAT2-201ENST00000630920 1752 ntBASIC9.03□□□□□ -0.96
LRCH3Q96II8 THG1L-201ENST00000231198 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 DTL-206ENST00000542077 4471 ntTSL 2 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 SLC12A6-203ENST00000397702 4096 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 SLFN13-210ENST00000534689 3058 ntTSL 2 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 MAPK10-240ENST00000639175 2596 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 SSR3-201ENST00000265044 3716 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 LOXHD1-211ENST00000579038 3632 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 AC104806.2-201ENST00000502400 1991 ntTSL 2 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
LRCH3Q96II8 AKAP13-217ENST00000560302 3765 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
LRCH3Q96II8 LINC02072-201ENST00000441895 2645 ntTSL 2 BASIC9.02□□□□□ -0.96
LRCH3Q96II8 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC9.02□□□□□ -0.96
LRCH3Q96II8 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
LRCH3Q96II8 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
LRCH3Q96II8 AC113189.6-201ENST00000636696 3591 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
LRCH3Q96II8 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
LRCH3Q96II8 TRIO-214ENST00000509967 4949 ntTSL 2 BASIC9.02□□□□□ -0.97
LRCH3Q96II8 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LRCH3Q96II8 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LRCH3Q96II8 RBFOX1-223ENST00000620507 4018 ntTSL 5 BASIC9.02□□□□□ -0.97
LRCH3Q96II8 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LRCH3Q96II8 SELENON-205ENST00000630065 2994 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LRCH3Q96II8 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC9.02□□□□□ -0.97
LRCH3Q96II8 TOM1L1-203ENST00000536554 1522 ntTSL 2 BASIC9.02□□□□□ -0.97
LRCH3Q96II8 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC9.02□□□□□ -0.97
LRCH3Q96II8 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
LRCH3Q96II8 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC9.02□□□□□ -0.97
LRCH3Q96II8 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
LRCH3Q96II8 NOX1-203ENST00000372964 661 ntTSL 2 BASIC9.02□□□□□ -0.97
LRCH3Q96II8 RNU6-463P-201ENST00000384340 107 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 RNU6-780P-201ENST00000391030 104 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 AC096664.1-201ENST00000393996 778 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 GAS8-AS1-201ENST00000408886 435 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC9.02□□□□□ -0.97
LRCH3Q96II8 RPL26P29-201ENST00000415623 438 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LRCH3Q96II8 FAM183DP-201ENST00000421987 399 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 USP9YP36-201ENST00000424581 829 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 NR1I3-209ENST00000428574 1117 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LRCH3Q96II8 MTCO3P21-201ENST00000430791 643 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC9.02□□□□□ -0.97
LRCH3Q96II8 OR7H1P-201ENST00000448965 922 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 VDAC2P4-201ENST00000452925 711 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC9.02□□□□□ -0.97
LRCH3Q96II8 CST12P-201ENST00000457644 362 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 RPL7AP52-201ENST00000458096 790 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 TRBV8-1-201ENST00000481590 279 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 FAM172BP-201ENST00000487497 1089 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 RPL7P24-201ENST00000493052 752 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 AC021087.2-201ENST00000504656 1203 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
LRCH3Q96II8 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
LRCH3Q96II8 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
LRCH3Q96II8 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LRCH3Q96II8 NR1I3-232ENST00000512372 861 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LRCH3Q96II8 RNA5SP459-201ENST00000516628 100 ntBASIC9.02□□□□□ -0.97
LRCH3Q96II8 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms