Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 AC008753.1-201ENST00000423096 284 ntBASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 AC010240.2-201ENST00000445363 1205 ntBASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 RN7SL254P-201ENST00000460609 284 ntBASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 AC012653.2-201ENST00000621880 420 ntBASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 AP001962.1-201ENST00000624114 559 ntBASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 TSHZ2-205ENST00000626626 670 ntBASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 OR7E91P-202ENST00000642062 1198 ntBASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 QRSL1P1-201ENST00000400977 1540 ntBASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
SHROOM1Q2M3G4 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 RPS7P14-201ENST00000426405 583 ntBASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 AL590004.3-202ENST00000445883 451 ntBASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 AL390728.3-201ENST00000452704 270 ntBASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 RN7SL104P-201ENST00000498686 293 ntBASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 AP005136.2-201ENST00000583253 1049 ntBASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 MIR6862-1-201ENST00000613016 70 ntBASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 MIR6862-2-201ENST00000614755 70 ntBASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 AC005393.1-201ENST00000617916 584 ntBASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 AC022400.9-201ENST00000623633 273 ntBASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 CLCA3P-203ENST00000490028 2781 ntBASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
SHROOM1Q2M3G4 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 MAPK10-365ENST00000641902 3825 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms