Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AL137067.2-201ENST00000621202 131 ntBASIC6.71□□□□□ -1.34
BRCA2P51587 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
BRCA2P51587 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
BRCA2P51587 LAMA3-201ENST00000269217 5671 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
BRCA2P51587 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
BRCA2P51587 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
BRCA2P51587 TSPAN14-206ENST00000372164 5476 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
BRCA2P51587 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
BRCA2P51587 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
BRCA2P51587 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC6.71□□□□□ -1.34
BRCA2P51587 AC105233.1-201ENST00000498840 781 ntBASIC6.7□□□□□ -1.34
BRCA2P51587 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.7□□□□□ -1.34
BRCA2P51587 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.7□□□□□ -1.34
BRCA2P51587 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.7□□□□□ -1.34
BRCA2P51587 AL645933.2-201ENST00000606743 1207 ntBASIC6.7□□□□□ -1.34
BRCA2P51587 AC083809.1-201ENST00000615051 472 ntBASIC6.7□□□□□ -1.34
BRCA2P51587 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.7□□□□□ -1.34
BRCA2P51587 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
BRCA2P51587 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
BRCA2P51587 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.7□□□□□ -1.34
BRCA2P51587 ZNF473-202ENST00000391821 4715 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
BRCA2P51587 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
BRCA2P51587 PCDH9-204ENST00000544246 6234 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
BRCA2P51587 AL139128.1-201ENST00000413921 941 ntBASIC6.7□□□□□ -1.34
BRCA2P51587 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.7□□□□□ -1.34
BRCA2P51587 AC023245.1-201ENST00000468501 517 ntBASIC6.7□□□□□ -1.34
BRCA2P51587 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.7□□□□□ -1.34
BRCA2P51587 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.7□□□□□ -1.34
BRCA2P51587 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.7□□□□□ -1.34
BRCA2P51587 AC133644.2-201ENST00000608142 540 ntBASIC6.7□□□□□ -1.34
BRCA2P51587 AC008957.3-201ENST00000624112 2242 ntBASIC6.7□□□□□ -1.34
BRCA2P51587 ESR1-208ENST00000443427 6357 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
BRCA2P51587 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.7□□□□□ -1.34
BRCA2P51587 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.7□□□□□ -1.34
BRCA2P51587 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
BRCA2P51587 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
BRCA2P51587 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
BRCA2P51587 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
BRCA2P51587 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.7□□□□□ -1.34
BRCA2P51587 AC113412.1-201ENST00000425840 504 ntBASIC6.7□□□□□ -1.34
BRCA2P51587 GYG1P1-201ENST00000460864 698 ntBASIC6.7□□□□□ -1.34
BRCA2P51587 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.7□□□□□ -1.34
BRCA2P51587 OR1F2P-201ENST00000570470 933 ntBASIC6.7□□□□□ -1.34
BRCA2P51587 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
BRCA2P51587 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
BRCA2P51587 DHX8-201ENST00000262415 5558 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
BRCA2P51587 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
BRCA2P51587 KIF24-202ENST00000402558 6131 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
BRCA2P51587 ATXN7L3B-201ENST00000519948 7604 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
BRCA2P51587 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.69□□□□□ -1.34
BRCA2P51587 SLC24A4-201ENST00000393265 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
BRCA2P51587 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
BRCA2P51587 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.69□□□□□ -1.34
BRCA2P51587 RN7SKP104-201ENST00000362605 328 ntBASIC6.69□□□□□ -1.34
BRCA2P51587 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.69□□□□□ -1.34
BRCA2P51587 AL360081.1-201ENST00000428299 555 ntBASIC6.69□□□□□ -1.34
BRCA2P51587 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.69□□□□□ -1.34
BRCA2P51587 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.69□□□□□ -1.34
BRCA2P51587 RN7SL459P-201ENST00000481078 302 ntBASIC6.69□□□□□ -1.34
BRCA2P51587 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.69□□□□□ -1.34
BRCA2P51587 PGAM1P13-201ENST00000507497 754 ntBASIC6.69□□□□□ -1.34
BRCA2P51587 AC008115.3-201ENST00000614874 549 ntBASIC6.69□□□□□ -1.34
BRCA2P51587 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.69□□□□□ -1.34
BRCA2P51587 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
BRCA2P51587 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
BRCA2P51587 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
BRCA2P51587 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.69□□□□□ -1.34
BRCA2P51587 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.69□□□□□ -1.34
BRCA2P51587 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.69□□□□□ -1.34
BRCA2P51587 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
BRCA2P51587 AC126755.2-208ENST00000327792 462 ntBASIC6.69□□□□□ -1.34
BRCA2P51587 AC138969.1-213ENST00000331436 462 ntBASIC6.69□□□□□ -1.34
BRCA2P51587 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.69□□□□□ -1.34
BRCA2P51587 OR11H13P-201ENST00000359695 979 ntBASIC6.69□□□□□ -1.34
BRCA2P51587 RNU105B-201ENST00000364478 208 ntBASIC6.69□□□□□ -1.34
BRCA2P51587 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.69□□□□□ -1.34
BRCA2P51587 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.69□□□□□ -1.34
BRCA2P51587 OR5AZ1P-201ENST00000527448 943 ntBASIC6.69□□□□□ -1.34
BRCA2P51587 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.69□□□□□ -1.34
BRCA2P51587 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.69□□□□□ -1.34
BRCA2P51587 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
BRCA2P51587 AC096861.1-201ENST00000616652 240 ntBASIC6.69□□□□□ -1.34
BRCA2P51587 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
BRCA2P51587 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.69□□□□□ -1.34
BRCA2P51587 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
BRCA2P51587 SPATA13-202ENST00000382095 6665 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
BRCA2P51587 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
BRCA2P51587 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
BRCA2P51587 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC6.69□□□□□ -1.34
BRCA2P51587 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.69□□□□□ -1.34
BRCA2P51587 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.69□□□□□ -1.34
BRCA2P51587 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
BRCA2P51587 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
BRCA2P51587 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.69□□□□□ -1.34
BRCA2P51587 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
BRCA2P51587 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.69□□□□□ -1.34
BRCA2P51587 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.69□□□□□ -1.34
BRCA2P51587 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
BRCA2P51587 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
BRCA2P51587 LINC01694-202ENST00000441095 6721 ntTSL 3 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms