Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 AL136984.1-201ENST00000607611 1893 ntBASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
KIAA1549Q9HCM3 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 RNA5SP346-201ENST00000363541 121 ntBASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 RN7SKP187-201ENST00000365536 330 ntBASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 Z83838.1-202ENST00000456225 839 ntBASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 RPS27P20-201ENST00000492051 246 ntBASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 IGKV3D-25-201ENST00000519599 235 ntBASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 AC008429.2-201ENST00000523057 864 ntBASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 AC084121.1-201ENST00000533882 835 ntBASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 AC110716.2-201ENST00000563865 3945 ntBASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 AL354854.1-201ENST00000455940 1363 ntBASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 AP002370.1-201ENST00000528055 1602 ntBASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 AL359694.2-201ENST00000567753 1615 ntBASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 GCNT1P4-201ENST00000404096 329 ntBASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 IGHV4-55-201ENST00000520889 368 ntBASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 OR4H6P-201ENST00000563771 921 ntBASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 AC005726.4-201ENST00000582858 458 ntBASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 AC073592.6-201ENST00000624271 415 ntBASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC5.78□□□□□ -1.48
KIAA1549Q9HCM3 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
KIAA1549Q9HCM3 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 AC007485.2-201ENST00000623493 1667 ntBASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 AL354707.3-201ENST00000427308 331 ntBASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 AL645939.3-201ENST00000435408 225 ntBASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 ZNF619P1-201ENST00000446539 752 ntBASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 OR7E99P-201ENST00000505750 922 ntBASIC5.77□□□□□ -1.49
KIAA1549Q9HCM3 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms