Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.15□□□□□ -1.26
TPM1P09493 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
TPM1P09493 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.15□□□□□ -1.27
TPM1P09493 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TPM1P09493 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC7.15□□□□□ -1.27
TPM1P09493 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
TPM1P09493 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.15□□□□□ -1.27
TPM1P09493 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TPM1P09493 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
TPM1P09493 AC110373.1-201ENST00000505994 3505 ntBASIC7.14□□□□□ -1.27
TPM1P09493 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TPM1P09493 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TPM1P09493 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TPM1P09493 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TPM1P09493 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.14□□□□□ -1.27
TPM1P09493 RNA5SP301-201ENST00000362537 121 ntBASIC7.14□□□□□ -1.27
TPM1P09493 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC7.14□□□□□ -1.27
TPM1P09493 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.14□□□□□ -1.27
TPM1P09493 AL357632.1-201ENST00000426688 643 ntBASIC7.14□□□□□ -1.27
TPM1P09493 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.14□□□□□ -1.27
TPM1P09493 OSTCP2-201ENST00000437956 444 ntBASIC7.14□□□□□ -1.27
TPM1P09493 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC7.14□□□□□ -1.27
TPM1P09493 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC7.14□□□□□ -1.27
TPM1P09493 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.14□□□□□ -1.27
TPM1P09493 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC7.14□□□□□ -1.27
TPM1P09493 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.14□□□□□ -1.27
TPM1P09493 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC7.14□□□□□ -1.27
TPM1P09493 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.14□□□□□ -1.27
TPM1P09493 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.14□□□□□ -1.27
TPM1P09493 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.14□□□□□ -1.27
TPM1P09493 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.14□□□□□ -1.27
TPM1P09493 AL132640.2-202ENST00000559732 614 ntBASIC7.14□□□□□ -1.27
TPM1P09493 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.14□□□□□ -1.27
TPM1P09493 LINC01616-201ENST00000561816 2280 ntBASIC7.14□□□□□ -1.27
TPM1P09493 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.14□□□□□ -1.27
TPM1P09493 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.14□□□□□ -1.27
TPM1P09493 AC020656.2-201ENST00000613291 5309 ntBASIC7.14□□□□□ -1.27
TPM1P09493 MRPL57P1-201ENST00000621486 265 ntBASIC7.14□□□□□ -1.27
TPM1P09493 AC018692.2-201ENST00000624130 348 ntBASIC7.14□□□□□ -1.27
TPM1P09493 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.14□□□□□ -1.27
TPM1P09493 AC243725.1-201ENST00000637164 436 ntBASIC7.14□□□□□ -1.27
TPM1P09493 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TPM1P09493 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TPM1P09493 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
TPM1P09493 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
TPM1P09493 AC023245.2-201ENST00000530760 2978 ntBASIC7.14□□□□□ -1.27
TPM1P09493 AC083837.1-201ENST00000565297 2994 ntBASIC7.14□□□□□ -1.27
TPM1P09493 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TPM1P09493 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TPM1P09493 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
TPM1P09493 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TPM1P09493 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TPM1P09493 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
TPM1P09493 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
TPM1P09493 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TPM1P09493 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.13□□□□□ -1.27
TPM1P09493 AC074141.1-201ENST00000588129 2995 ntBASIC7.13□□□□□ -1.27
TPM1P09493 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.13□□□□□ -1.27
TPM1P09493 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TPM1P09493 AL138847.1-201ENST00000258651 546 ntBASIC7.13□□□□□ -1.27
TPM1P09493 RN7SKP189-201ENST00000365042 330 ntBASIC7.13□□□□□ -1.27
TPM1P09493 RN7SKP236-201ENST00000410635 284 ntBASIC7.13□□□□□ -1.27
TPM1P09493 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC7.13□□□□□ -1.27
TPM1P09493 SPATA20P1-201ENST00000423089 438 ntBASIC7.13□□□□□ -1.27
TPM1P09493 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC7.13□□□□□ -1.27
TPM1P09493 OR13K1P-201ENST00000444577 975 ntBASIC7.13□□□□□ -1.27
TPM1P09493 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC7.13□□□□□ -1.27
TPM1P09493 OR7E7P-201ENST00000455678 1012 ntBASIC7.13□□□□□ -1.27
TPM1P09493 MED28P7-201ENST00000456611 530 ntBASIC7.13□□□□□ -1.27
TPM1P09493 RN7SL91P-201ENST00000469313 291 ntBASIC7.13□□□□□ -1.27
TPM1P09493 AC018475.1-201ENST00000478358 465 ntBASIC7.13□□□□□ -1.27
TPM1P09493 RN7SL849P-201ENST00000485236 295 ntBASIC7.13□□□□□ -1.27
TPM1P09493 PDPN-205ENST00000487038 607 ntTSL 2 BASIC7.13□□□□□ -1.27
TPM1P09493 AL445383.1-201ENST00000554689 874 ntBASIC7.13□□□□□ -1.27
TPM1P09493 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TPM1P09493 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.13□□□□□ -1.27
TPM1P09493 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.13□□□□□ -1.27
TPM1P09493 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.13□□□□□ -1.27
TPM1P09493 AL161931.1-201ENST00000612768 246 ntBASIC7.13□□□□□ -1.27
TPM1P09493 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
TPM1P09493 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TPM1P09493 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TPM1P09493 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
TPM1P09493 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.13□□□□□ -1.27
TPM1P09493 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
TPM1P09493 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
TPM1P09493 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
TPM1P09493 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TPM1P09493 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.12□□□□□ -1.27
TPM1P09493 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TPM1P09493 AC011815.2-201ENST00000618230 2021 ntBASIC7.12□□□□□ -1.27
TPM1P09493 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TPM1P09493 NEK2P2-201ENST00000438441 1338 ntBASIC7.12□□□□□ -1.27
TPM1P09493 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TPM1P09493 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.12□□□□□ -1.27
TPM1P09493 RPL23AP17-201ENST00000401064 499 ntBASIC7.12□□□□□ -1.27
TPM1P09493 AL359694.1-201ENST00000403247 604 ntBASIC7.12□□□□□ -1.27
TPM1P09493 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
TPM1P09493 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TPM1P09493 GYG1P2-201ENST00000426437 1006 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms