RNA–Protein interactions for RNA: ENST00000438618.2

LINC00271-203, long intergenic non-protein coding RNA 271, humanhuman

TSL 3 BASIC

Gene LINC00271, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-203ENST00000438618 AEBP2Q6ZN18 517 aaPredicted RBP29.14■■■□□ 2.26
LINC00271-203ENST00000438618 CHIC1Q5VXU3 224 aa27.97■■■□□ 2.07
LINC00271-203ENST00000438618 SENP3Q9H4L4 574 aaPredicted RBP24.93■■□□□ 1.58
LINC00271-203ENST00000438618 PHF23Q9BUL5 403 aaPredicted RBP24.62■■□□□ 1.53
LINC00271-203ENST00000438618 FOXD1Q16676 465 aa23.14■■□□□ 1.29
LINC00271-203ENST00000438618 PLPPR3Q6T4P5 718 aa22.53■■□□□ 1.2
LINC00271-203ENST00000438618 ADRA2BP18089 450 aa21.82■■□□□ 1.08
LINC00271-203ENST00000438618 PPP6R1Q9UPN7 881 aa21.8■■□□□ 1.08
LINC00271-203ENST00000438618 PIAS4Q8N2W9 510 aaPredicted RBP21.78■■□□□ 1.08
LINC00271-203ENST00000438618 MSH5O43196 834 aa21.64■■□□□ 1.05
LINC00271-203ENST00000438618 POTEDQ86YR6 584 aa20.63■□□□□ 0.89
LINC00271-203ENST00000438618 SCAF1Q9H7N4 1312 aaKnown RBP20.06■□□□□ 0.8
LINC00271-203ENST00000438618 MAPK8IP2Q13387 824 aaPredicted RBP19.95■□□□□ 0.78
LINC00271-203ENST00000438618 PPP4R3CPQ6ZMV5 832 aa19.78■□□□□ 0.76
LINC00271-203ENST00000438618 DMRT2Q9Y5R5 561 aa19.76■□□□□ 0.75
LINC00271-203ENST00000438618 CNKSR2Q8WXI2 1034 aa19.35■□□□□ 0.69
LINC00271-203ENST00000438618 NCBP3Q53F19 620 aaKnown RBP19.17■□□□□ 0.66
LINC00271-203ENST00000438618 DCAF8L1A6NGE4 600 aa19.14■□□□□ 0.65
LINC00271-203ENST00000438618 HOXD11P31277 338 aaPredicted RBP19.11■□□□□ 0.65
LINC00271-203ENST00000438618 RNF216Q9NWF9 866 aaPredicted RBP19.08■□□□□ 0.64
LINC00271-203ENST00000438618 NPM3O75607 178 aaKnown RBP18.78■□□□□ 0.6
LINC00271-203ENST00000438618 KCNA4P22459 653 aa18.65■□□□□ 0.58
LINC00271-203ENST00000438618 CACNB1Q02641 598 aaPredicted RBP18.47■□□□□ 0.55
LINC00271-203ENST00000438618 RNF39Q9H2S5 420 aa18.42■□□□□ 0.54
LINC00271-203ENST00000438618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.37■□□□□ 0.53
LINC00271-203ENST00000438618 DNAJC5BQ9UF47 199 aa18.37■□□□□ 0.53
LINC00271-203ENST00000438618 C1QBPQ07021 282 aaKnown RBP18.21■□□□□ 0.51
LINC00271-203ENST00000438618 U3KPZ7 1027 aaPredicted RBP17.88■□□□□ 0.45
LINC00271-203ENST00000438618 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
LINC00271-203ENST00000438618 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
LINC00271-203ENST00000438618 CAPN15O75808 1086 aa17.64■□□□□ 0.41
LINC00271-203ENST00000438618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.58■□□□□ 0.4
LINC00271-203ENST00000438618 HNRNPUL2Q1KMD3 747 aaKnown RBP17.58■□□□□ 0.4
LINC00271-203ENST00000438618 SPINK5Q9NQ38 1064 aaPredicted RBP17.57■□□□□ 0.4
LINC00271-203ENST00000438618 APLP2Q06481 763 aa17.56■□□□□ 0.4
LINC00271-203ENST00000438618 NISCHQ9Y2I1 1504 aa17.47■□□□□ 0.39
LINC00271-203ENST00000438618 SAMD1Q6SPF0 538 aaPredicted RBP17.46■□□□□ 0.39
LINC00271-203ENST00000438618 MYCNP04198 464 aaPredicted RBP17.42■□□□□ 0.38
LINC00271-203ENST00000438618 TRHP20396 242 aaPredicted RBP17.41■□□□□ 0.38
LINC00271-203ENST00000438618 FOXD4L1Q9NU39 408 aa17.36■□□□□ 0.37
LINC00271-203ENST00000438618 ZNF219Q9P2Y4 722 aaPredicted RBP17.35■□□□□ 0.37
LINC00271-203ENST00000438618 DSG3P32926 999 aa17.34■□□□□ 0.37
LINC00271-203ENST00000438618 ABCB7O75027 752 aa17.22■□□□□ 0.35
LINC00271-203ENST00000438618 ZBTB22O15209 634 aa17.09■□□□□ 0.33
LINC00271-203ENST00000438618 POLA2Q14181 598 aa16.95■□□□□ 0.3
LINC00271-203ENST00000438618 ATF5Q9Y2D1 282 aaPredicted RBP16.92■□□□□ 0.3
LINC00271-203ENST00000438618 ATXN8OSP0DMR3 200 aa16.78■□□□□ 0.28
LINC00271-203ENST00000438618 ZBTB12Q9Y330 459 aaPredicted RBP16.66■□□□□ 0.26
LINC00271-203ENST00000438618 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
LINC00271-203ENST00000438618 EHMT2Q96KQ7 1210 aa16.63■□□□□ 0.25
LINC00271-203ENST00000438618 CSRNP3Q8WYN3 585 aa16.57■□□□□ 0.24
LINC00271-203ENST00000438618 FBLN2P98095 1184 aa16.4■□□□□ 0.22
LINC00271-203ENST00000438618 OSCARQ8IYS5 282 aa16.38■□□□□ 0.21
LINC00271-203ENST00000438618 AKT1S1Q96B36 256 aa16.27■□□□□ 0.2
LINC00271-203ENST00000438618 POTEHQ6S545 545 aa16.25■□□□□ 0.19
LINC00271-203ENST00000438618 MKRN4PQ13434 485 aaPredicted RBP16.13■□□□□ 0.17
LINC00271-203ENST00000438618 CHRDL2Q6WN34 429 aa16.13■□□□□ 0.17
LINC00271-203ENST00000438618 SPDYE2BA6NHP3 402 aa16.12■□□□□ 0.17
LINC00271-203ENST00000438618 SPDYE6P0CI01 402 aa16.12■□□□□ 0.17
LINC00271-203ENST00000438618 SPDYE2Q495Y8 402 aa16.12■□□□□ 0.17
LINC00271-203ENST00000438618 REM2Q8IYK8 340 aaPredicted RBP16.1■□□□□ 0.17
LINC00271-203ENST00000438618 ZNF692Q9BU19 519 aaPredicted RBP16.02■□□□□ 0.16
LINC00271-203ENST00000438618 PITPNM1O00562 1244 aa15.92■□□□□ 0.14
LINC00271-203ENST00000438618 SSUH2Q9Y2M2 353 aa15.86■□□□□ 0.13
LINC00271-203ENST00000438618 CLEC11AQ9Y240 323 aa15.84■□□□□ 0.13
LINC00271-203ENST00000438618 SPDYE1Q8NFV5 336 aaPredicted RBP15.81■□□□□ 0.12
LINC00271-203ENST00000438618 PIP4P2Q8N4L2 257 aa15.78■□□□□ 0.12
LINC00271-203ENST00000438618 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
LINC00271-203ENST00000438618 FXR2P51116 673 aaKnown RBP eCLIP15.7■□□□□ 0.1
LINC00271-203ENST00000438618 SPDYE4A6NLX3 237 aa15.62■□□□□ 0.09
LINC00271-203ENST00000438618 PRR29P0C7W0 189 aa15.59■□□□□ 0.09
LINC00271-203ENST00000438618 ABCC9O60706 1549 aa15.57■□□□□ 0.08
LINC00271-203ENST00000438618 PRKAR2AP13861 404 aaKnown RBP15.56■□□□□ 0.08
LINC00271-203ENST00000438618 HAX1O00165 279 aa15.53■□□□□ 0.08
LINC00271-203ENST00000438618 CCDC180Q9P1Z9 1646 aa15.53■□□□□ 0.08
LINC00271-203ENST00000438618 CHADLQ6NUI6 762 aa15.43■□□□□ 0.06
LINC00271-203ENST00000438618 STAG3Q9UJ98 1225 aa15.42■□□□□ 0.06
LINC00271-203ENST00000438618 SP7Q8TDD2 431 aaPredicted RBP15.36■□□□□ 0.05
LINC00271-203ENST00000438618 FARP1Q9Y4F1 1045 aaPredicted RBP15.21■□□□□ 0.03
LINC00271-203ENST00000438618 EVX2Q03828 476 aa15.2■□□□□ 0.02
LINC00271-203ENST00000438618 C19orf67A6NJJ6 358 aa15.19■□□□□ 0.02
LINC00271-203ENST00000438618 CREBZFQ9NS37 354 aa15.15■□□□□ 0.02
LINC00271-203ENST00000438618 FKBP8Q14318 412 aa15.12■□□□□ 0.01
LINC00271-203ENST00000438618 PROM2Q8N271 834 aa15.12■□□□□ 0.01
LINC00271-203ENST00000438618 CD44P16070 742 aaKnown RBP15.09■□□□□ 0.01
LINC00271-203ENST00000438618 NPM1P06748 294 aaKnown RBP eCLIP15□□□□□ -0.01
LINC00271-203ENST00000438618 PLEKHG5O94827 1062 aa14.98□□□□□ -0.01
LINC00271-203ENST00000438618 PAK3O75914 559 aaPredicted RBP14.95□□□□□ -0.02
LINC00271-203ENST00000438618 GABBR2O75899 941 aa14.94□□□□□ -0.02
LINC00271-203ENST00000438618 DCAF8L2P0C7V8 631 aa14.94□□□□□ -0.02
LINC00271-203ENST00000438618 ZRANB1Q9UGI0 708 aa14.94□□□□□ -0.02
LINC00271-203ENST00000438618 MIER1Q8N108 512 aa14.93□□□□□ -0.02
LINC00271-203ENST00000438618 PLCD3Q8N3E9 789 aa14.87□□□□□ -0.03
LINC00271-203ENST00000438618 MNX1P50219 401 aaPredicted RBP14.85□□□□□ -0.03
LINC00271-203ENST00000438618 CLCN6P51797 869 aa14.82□□□□□ -0.04
LINC00271-203ENST00000438618 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
LINC00271-203ENST00000438618 ZNF579Q8NAF0 562 aaKnown RBP14.8□□□□□ -0.04
LINC00271-203ENST00000438618 FBXO3Q9UK99 471 aa14.76□□□□□ -0.05
LINC00271-203ENST00000438618 NACADO15069 1562 aa14.73□□□□□ -0.05
LINC00271-203ENST00000438618 TSPYL2Q9H2G4 693 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 197.8 ms