Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G3Q9Y6M4 MMP23A-201ENST00000234610 1017 ntBASIC19.44■□□□□ 0.7
CSNK1G3Q9Y6M4 NUDT16P1-203ENST00000513809 620 ntBASIC19.44■□□□□ 0.7
CSNK1G3Q9Y6M4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.44■□□□□ 0.7
CSNK1G3Q9Y6M4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G3Q9Y6M4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.44■□□□□ 0.7
CSNK1G3Q9Y6M4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CSNK1G3Q9Y6M4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G3Q9Y6M4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G3Q9Y6M4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G3Q9Y6M4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G3Q9Y6M4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G3Q9Y6M4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G3Q9Y6M4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G3Q9Y6M4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 PLK5-205ENST00000642079 1969 ntBASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 MIR1224-201ENST00000408193 85 ntBASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 AF106564.1-201ENST00000607058 2553 ntBASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.43■□□□□ 0.7
CSNK1G3Q9Y6M4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 KSR1P1-201ENST00000446298 240 ntBASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.42■□□□□ 0.7
CSNK1G3Q9Y6M4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1G3Q9Y6M4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK1G3Q9Y6M4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK1G3Q9Y6M4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK1G3Q9Y6M4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.4■□□□□ 0.7
CSNK1G3Q9Y6M4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK1G3Q9Y6M4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK1G3Q9Y6M4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.4■□□□□ 0.7
CSNK1G3Q9Y6M4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.4■□□□□ 0.7
CSNK1G3Q9Y6M4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK1G3Q9Y6M4 KRT18P21-201ENST00000515767 1272 ntBASIC19.4■□□□□ 0.7
CSNK1G3Q9Y6M4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK1G3Q9Y6M4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK1G3Q9Y6M4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.4■□□□□ 0.7
CSNK1G3Q9Y6M4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSNK1G3Q9Y6M4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.4■□□□□ 0.7
CSNK1G3Q9Y6M4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.39■□□□□ 0.7
CSNK1G3Q9Y6M4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CSNK1G3Q9Y6M4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CSNK1G3Q9Y6M4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms