Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 AC018445.3-201ENST00000624177 1945 ntBASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 AL138781.1-201ENST00000566567 1274 ntBASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB3Q9Y5G1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 AC125437.2-201ENST00000625180 2167 ntBASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 KRT18P68-201ENST00000392293 1000 ntBASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 KRT18P6-201ENST00000555540 1265 ntBASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 DPP3P2-201ENST00000416030 1696 ntBASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 MKRN4P-201ENST00000444706 1521 ntBASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGB3Q9Y5G1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 CD99P1-205ENST00000527459 561 ntBASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB3Q9Y5G1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGB3Q9Y5G1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGB3Q9Y5G1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDHGB3Q9Y5G1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGB3Q9Y5G1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 AC092118.2-201ENST00000613495 667 ntBASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB3Q9Y5G1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms