Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RTCBQ9Y3I0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.62
RTCBQ9Y3I0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.62
RTCBQ9Y3I0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
RTCBQ9Y3I0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RTCBQ9Y3I0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC25.14■■□□□ 1.62
RTCBQ9Y3I0 RNF152P1-201ENST00000397754 604 ntBASIC25.14■■□□□ 1.62
RTCBQ9Y3I0 AL031133.1-201ENST00000406807 723 ntBASIC25.14■■□□□ 1.62
RTCBQ9Y3I0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC25.14■■□□□ 1.62
RTCBQ9Y3I0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC25.14■■□□□ 1.62
RTCBQ9Y3I0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC25.14■■□□□ 1.62
RTCBQ9Y3I0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.62
RTCBQ9Y3I0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RTCBQ9Y3I0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC25.14■■□□□ 1.62
RTCBQ9Y3I0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC25.14■■□□□ 1.61
RTCBQ9Y3I0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.14■■□□□ 1.61
RTCBQ9Y3I0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RTCBQ9Y3I0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.61
RTCBQ9Y3I0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RTCBQ9Y3I0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.14■■□□□ 1.61
RTCBQ9Y3I0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 AC116562.4-202ENST00000641738 218 ntBASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
RTCBQ9Y3I0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
RTCBQ9Y3I0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.12■■□□□ 1.61
RTCBQ9Y3I0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RTCBQ9Y3I0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTCBQ9Y3I0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTCBQ9Y3I0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTCBQ9Y3I0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTCBQ9Y3I0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
RTCBQ9Y3I0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTCBQ9Y3I0 AC011298.2-201ENST00000617989 482 ntBASIC25.12■■□□□ 1.61
RTCBQ9Y3I0 RCC2P6-201ENST00000526625 1557 ntBASIC25.12■■□□□ 1.61
RTCBQ9Y3I0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RTCBQ9Y3I0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTCBQ9Y3I0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
RTCBQ9Y3I0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC25.1■■□□□ 1.61
RTCBQ9Y3I0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC25.1■■□□□ 1.61
RTCBQ9Y3I0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC25.1■■□□□ 1.61
RTCBQ9Y3I0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RTCBQ9Y3I0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTCBQ9Y3I0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTCBQ9Y3I0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC25.1■■□□□ 1.61
RTCBQ9Y3I0 AC008040.2-201ENST00000461049 708 ntBASIC25.1■■□□□ 1.61
RTCBQ9Y3I0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RTCBQ9Y3I0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC25.1■■□□□ 1.61
RTCBQ9Y3I0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC25.1■■□□□ 1.61
RTCBQ9Y3I0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RTCBQ9Y3I0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC25.1■■□□□ 1.61
RTCBQ9Y3I0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTCBQ9Y3I0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC25.1■■□□□ 1.61
RTCBQ9Y3I0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTCBQ9Y3I0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RTCBQ9Y3I0 AC018553.1-201ENST00000616682 1458 ntBASIC25.09■■□□□ 1.61
RTCBQ9Y3I0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.09■■□□□ 1.61
RTCBQ9Y3I0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RTCBQ9Y3I0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC25.09■■□□□ 1.61
RTCBQ9Y3I0 TSPY5P-201ENST00000426936 936 ntBASIC25.09■■□□□ 1.61
RTCBQ9Y3I0 CCR12P-201ENST00000446203 998 ntBASIC25.09■■□□□ 1.61
RTCBQ9Y3I0 YBX1P2-201ENST00000489612 999 ntBASIC25.09■■□□□ 1.61
RTCBQ9Y3I0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC25.09■■□□□ 1.61
RTCBQ9Y3I0 KRT18P56-201ENST00000507275 550 ntBASIC25.09■■□□□ 1.61
RTCBQ9Y3I0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms