Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PDZRN3Q9UPQ7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC25.62■■□□□ 1.69
PDZRN3Q9UPQ7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
PDZRN3Q9UPQ7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PDZRN3Q9UPQ7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 AC087633.2-202ENST00000565166 1439 ntBASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDZRN3Q9UPQ7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDZRN3Q9UPQ7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDZRN3Q9UPQ7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
PDZRN3Q9UPQ7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC25.6■■□□□ 1.69
PDZRN3Q9UPQ7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDZRN3Q9UPQ7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.6■■□□□ 1.69
PDZRN3Q9UPQ7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDZRN3Q9UPQ7 PGM5P4-201ENST00000421970 445 ntBASIC25.6■■□□□ 1.69
PDZRN3Q9UPQ7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC25.6■■□□□ 1.69
PDZRN3Q9UPQ7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC25.6■■□□□ 1.69
PDZRN3Q9UPQ7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PDZRN3Q9UPQ7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDZRN3Q9UPQ7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PDZRN3Q9UPQ7 AFG3L1P-217ENST00000557444 2447 ntBASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 PRKY-204ENST00000533551 1019 ntBASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PDZRN3Q9UPQ7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 KRASP1-201ENST00000407852 552 ntBASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC25.58■■□□□ 1.69
PDZRN3Q9UPQ7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC25.57■■□□□ 1.68
PDZRN3Q9UPQ7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC25.57■■□□□ 1.68
PDZRN3Q9UPQ7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDZRN3Q9UPQ7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDZRN3Q9UPQ7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDZRN3Q9UPQ7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PDZRN3Q9UPQ7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
PDZRN3Q9UPQ7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC25.57■■□□□ 1.68
PDZRN3Q9UPQ7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC25.57■■□□□ 1.68
PDZRN3Q9UPQ7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
PDZRN3Q9UPQ7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC25.57■■□□□ 1.68
PDZRN3Q9UPQ7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC25.57■■□□□ 1.68
PDZRN3Q9UPQ7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PDZRN3Q9UPQ7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDZRN3Q9UPQ7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
PDZRN3Q9UPQ7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms