Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SALL4Q9UJQ4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SALL4Q9UJQ4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.09■□□□□ 0.97
SALL4Q9UJQ4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.09■□□□□ 0.97
SALL4Q9UJQ4 AL162412.1-201ENST00000567129 965 ntBASIC21.09■□□□□ 0.97
SALL4Q9UJQ4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SALL4Q9UJQ4 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.09■□□□□ 0.97
SALL4Q9UJQ4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SALL4Q9UJQ4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SALL4Q9UJQ4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SALL4Q9UJQ4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SALL4Q9UJQ4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.08■□□□□ 0.97
SALL4Q9UJQ4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SALL4Q9UJQ4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SALL4Q9UJQ4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SALL4Q9UJQ4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.08■□□□□ 0.97
SALL4Q9UJQ4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.08■□□□□ 0.97
SALL4Q9UJQ4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SALL4Q9UJQ4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SALL4Q9UJQ4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.08■□□□□ 0.97
SALL4Q9UJQ4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
SALL4Q9UJQ4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
SALL4Q9UJQ4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.08■□□□□ 0.96
SALL4Q9UJQ4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SALL4Q9UJQ4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.08■□□□□ 0.96
SALL4Q9UJQ4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 AL032819.2-201ENST00000624543 2162 ntBASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 AC093503.3-201ENST00000624917 2352 ntBASIC21.07■□□□□ 0.96
SALL4Q9UJQ4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 CNN2P6-201ENST00000439038 900 ntBASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 AC006970.2-201ENST00000450065 779 ntBASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SALL4Q9UJQ4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 CROCCP5-201ENST00000436658 830 ntBASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 RARRES2P4-201ENST00000514074 484 ntBASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 MFSD11-216ENST00000590393 1141 ntBASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 AL031963.3-201ENST00000606441 850 ntBASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 AC013268.1-206ENST00000638368 961 ntBASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 AC112229.1-201ENST00000639295 961 ntBASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.05■□□□□ 0.96
SALL4Q9UJQ4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
SALL4Q9UJQ4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SALL4Q9UJQ4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.04■□□□□ 0.96
SALL4Q9UJQ4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SALL4Q9UJQ4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SALL4Q9UJQ4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms