Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSFQ9UBX1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 AC020907.5-201ENST00000624372 1936 ntBASIC18.68■□□□□ 0.58
CTSFQ9UBX1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 MIR4497-201ENST00000583208 89 ntBASIC18.68■□□□□ 0.58
CTSFQ9UBX1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 AC092667.1-201ENST00000434301 2586 ntBASIC18.68■□□□□ 0.58
CTSFQ9UBX1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSFQ9UBX1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 RARRES2P10-201ENST00000564312 460 ntBASIC18.67■□□□□ 0.58
CTSFQ9UBX1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTSFQ9UBX1 AL135905.2-201ENST00000584934 1404 ntBASIC18.66■□□□□ 0.58
CTSFQ9UBX1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 KRT16P5-201ENST00000455284 522 ntBASIC18.66■□□□□ 0.58
CTSFQ9UBX1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 AL049637.2-201ENST00000641778 930 ntBASIC18.66■□□□□ 0.58
CTSFQ9UBX1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTSFQ9UBX1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 TSPY7P-201ENST00000431358 1114 ntBASIC18.65■□□□□ 0.58
CTSFQ9UBX1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms