Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
LRFN1Q9P244 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.23■□□□□ 0.51
LRFN1Q9P244 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.23■□□□□ 0.51
LRFN1Q9P244 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.23■□□□□ 0.51
LRFN1Q9P244 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LRFN1Q9P244 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN1Q9P244 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.23■□□□□ 0.51
LRFN1Q9P244 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.23■□□□□ 0.51
LRFN1Q9P244 KRT16P6-202ENST00000425692 1426 ntBASIC18.23■□□□□ 0.51
LRFN1Q9P244 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN1Q9P244 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN1Q9P244 HTR7P1-201ENST00000538670 1336 ntBASIC18.23■□□□□ 0.51
LRFN1Q9P244 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.22■□□□□ 0.51
LRFN1Q9P244 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.22■□□□□ 0.51
LRFN1Q9P244 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.22■□□□□ 0.51
LRFN1Q9P244 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.22■□□□□ 0.51
LRFN1Q9P244 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 AC113410.3-201ENST00000623366 203 ntBASIC18.22■□□□□ 0.51
LRFN1Q9P244 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
LRFN1Q9P244 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRFN1Q9P244 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.22■□□□□ 0.51
LRFN1Q9P244 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRFN1Q9P244 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
LRFN1Q9P244 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LRFN1Q9P244 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.21■□□□□ 0.51
LRFN1Q9P244 AC007375.3-201ENST00000600936 2314 ntBASIC18.21■□□□□ 0.51
LRFN1Q9P244 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.21■□□□□ 0.51
LRFN1Q9P244 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN1Q9P244 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN1Q9P244 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN1Q9P244 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRFN1Q9P244 AL353807.1-201ENST00000427475 662 ntBASIC18.21■□□□□ 0.51
LRFN1Q9P244 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.21■□□□□ 0.51
LRFN1Q9P244 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.21■□□□□ 0.51
LRFN1Q9P244 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.21■□□□□ 0.51
LRFN1Q9P244 MIR4785-201ENST00000585005 73 ntBASIC18.21■□□□□ 0.51
LRFN1Q9P244 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.21■□□□□ 0.51
LRFN1Q9P244 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
LRFN1Q9P244 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN1Q9P244 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN1Q9P244 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRFN1Q9P244 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.21■□□□□ 0.51
LRFN1Q9P244 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN1Q9P244 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
LRFN1Q9P244 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
LRFN1Q9P244 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN1Q9P244 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN1Q9P244 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.2■□□□□ 0.5
LRFN1Q9P244 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN1Q9P244 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN1Q9P244 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LRFN1Q9P244 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN1Q9P244 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.2■□□□□ 0.5
LRFN1Q9P244 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.2■□□□□ 0.5
LRFN1Q9P244 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN1Q9P244 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN1Q9P244 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN1Q9P244 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRFN1Q9P244 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.2■□□□□ 0.5
LRFN1Q9P244 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.2■□□□□ 0.5
LRFN1Q9P244 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRFN1Q9P244 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.2■□□□□ 0.5
LRFN1Q9P244 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.2■□□□□ 0.5
LRFN1Q9P244 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LRFN1Q9P244 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN1Q9P244 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN1Q9P244 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.19■□□□□ 0.5
LRFN1Q9P244 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN1Q9P244 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN1Q9P244 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN1Q9P244 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN1Q9P244 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
LRFN1Q9P244 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.19■□□□□ 0.5
LRFN1Q9P244 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.19■□□□□ 0.5
LRFN1Q9P244 AF186192.3-201ENST00000583427 947 ntBASIC18.19■□□□□ 0.5
LRFN1Q9P244 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
LRFN1Q9P244 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.19■□□□□ 0.5
LRFN1Q9P244 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN1Q9P244 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN1Q9P244 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN1Q9P244 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN1Q9P244 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.19■□□□□ 0.5
LRFN1Q9P244 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN1Q9P244 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms