Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 AL691432.2-201ENST00000607222 2038 ntBASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 AC124016.1-201ENST00000609552 612 ntBASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 KRASP1-201ENST00000407852 552 ntBASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 AC239809.2-201ENST00000415381 517 ntBASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 PHGDH-210ENST00000641115 1638 ntBASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPHK1Q9NYA1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 AC116351.2-201ENST00000606540 1585 ntBASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 AC018553.1-201ENST00000616682 1458 ntBASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 FAM197Y4-202ENST00000622692 608 ntBASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SPHK1Q9NYA1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPHK1Q9NYA1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPHK1Q9NYA1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SPHK1Q9NYA1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPHK1Q9NYA1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPHK1Q9NYA1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPHK1Q9NYA1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPHK1Q9NYA1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SPHK1Q9NYA1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPHK1Q9NYA1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPHK1Q9NYA1 PRKY-204ENST00000533551 1019 ntBASIC19.11■□□□□ 0.65
SPHK1Q9NYA1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SPHK1Q9NYA1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPHK1Q9NYA1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPHK1Q9NYA1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPHK1Q9NYA1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.11■□□□□ 0.65
SPHK1Q9NYA1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SPHK1Q9NYA1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms