Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NDE1Q9NXR1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NDE1Q9NXR1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDE1Q9NXR1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDE1Q9NXR1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NDE1Q9NXR1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.17■□□□□ 0.66
NDE1Q9NXR1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.17■□□□□ 0.66
NDE1Q9NXR1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.17■□□□□ 0.66
NDE1Q9NXR1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 GUSBP5-201ENST00000418136 578 ntBASIC19.16■□□□□ 0.66
NDE1Q9NXR1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NDE1Q9NXR1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 AC009237.14-201ENST00000609975 1594 ntBASIC19.15■□□□□ 0.66
NDE1Q9NXR1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDE1Q9NXR1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
NDE1Q9NXR1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.14■□□□□ 0.66
NDE1Q9NXR1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 FAM21FP-204ENST00000608637 956 ntBASIC19.14■□□□□ 0.65
NDE1Q9NXR1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NDE1Q9NXR1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms