Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 KRT8P36-201ENST00000489121 1440 ntBASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 KRT19P1-201ENST00000405746 1186 ntBASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 AC245052.3-201ENST00000450182 901 ntBASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 AC011767.1-201ENST00000617410 1153 ntBASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCM2LQ9NUG4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCM2LQ9NUG4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CCM2LQ9NUG4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CCM2LQ9NUG4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.83■□□□□ 0.61
CCM2LQ9NUG4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.83■□□□□ 0.61
CCM2LQ9NUG4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCM2LQ9NUG4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCM2LQ9NUG4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2LQ9NUG4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2LQ9NUG4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCM2LQ9NUG4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCM2LQ9NUG4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2LQ9NUG4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.83■□□□□ 0.6
CCM2LQ9NUG4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.83■□□□□ 0.6
CCM2LQ9NUG4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2LQ9NUG4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CCM2LQ9NUG4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.83■□□□□ 0.6
CCM2LQ9NUG4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.83■□□□□ 0.6
CCM2LQ9NUG4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2LQ9NUG4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CCM2LQ9NUG4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.83■□□□□ 0.6
CCM2LQ9NUG4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCM2LQ9NUG4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CCM2LQ9NUG4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CCM2LQ9NUG4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.81■□□□□ 0.6
CCM2LQ9NUG4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCM2LQ9NUG4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.81■□□□□ 0.6
CCM2LQ9NUG4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2LQ9NUG4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2LQ9NUG4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2LQ9NUG4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.81■□□□□ 0.6
CCM2LQ9NUG4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2LQ9NUG4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2LQ9NUG4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2LQ9NUG4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2LQ9NUG4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.81■□□□□ 0.6
CCM2LQ9NUG4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2LQ9NUG4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2LQ9NUG4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCM2LQ9NUG4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.81■□□□□ 0.6
CCM2LQ9NUG4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 AL138781.2-201ENST00000617896 1843 ntBASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCM2LQ9NUG4 KRT16P2-201ENST00000414673 1423 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms