Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 AC093484.2-201ENST00000580996 2166 ntBASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 AC135776.1-201ENST00000319817 2481 ntBASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 TCF3P1-201ENST00000423021 1937 ntBASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC10.25□□□□□ -0.77
CDC42SE1Q9NRR8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 TCAF2P1-201ENST00000291129 2421 ntBASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 AL118508.1-201ENST00000613502 2345 ntBASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 TK2-221ENST00000620035 5060 ntTSL 2 BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 AC090164.3-201ENST00000610780 2143 ntBASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CDC42SE1Q9NRR8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 BICD1-207ENST00000551848 1962 ntBASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 AC068587.6-202ENST00000641839 5619 ntBASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CDC42SE1Q9NRR8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
CDC42SE1Q9NRR8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC10.22□□□□□ -0.77
CDC42SE1Q9NRR8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
CDC42SE1Q9NRR8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
CDC42SE1Q9NRR8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
CDC42SE1Q9NRR8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CDC42SE1Q9NRR8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CDC42SE1Q9NRR8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CDC42SE1Q9NRR8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CDC42SE1Q9NRR8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CDC42SE1Q9NRR8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms