Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 KRT18P29-201ENST00000397031 1267 ntBASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 AC073130.3-201ENST00000624389 2278 ntBASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.75■□□□□ 0.59
PRDM9Q9NQV7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 AC128676.1-201ENST00000454392 318 ntBASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 TMEM191A-211ENST00000637163 1067 ntBASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 AL691432.2-201ENST00000607222 2038 ntBASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM9Q9NQV7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 AC073648.6-201ENST00000641589 218 ntBASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 PHGDH-210ENST00000641115 1638 ntBASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRDM9Q9NQV7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms