Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HPS4Q9NQG7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 AC073195.1-201ENST00000607241 877 ntBASIC20.55■□□□□ 0.88
HPS4Q9NQG7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 FEM1AP4-201ENST00000443167 1987 ntBASIC20.55■□□□□ 0.88
HPS4Q9NQG7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HPS4Q9NQG7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 HLA-G-202ENST00000376815 851 ntBASIC20.54■□□□□ 0.88
HPS4Q9NQG7 HLA-G-203ENST00000376818 1127 ntBASIC20.54■□□□□ 0.88
HPS4Q9NQG7 RCN1P1-201ENST00000400413 996 ntBASIC20.54■□□□□ 0.88
HPS4Q9NQG7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.54■□□□□ 0.88
HPS4Q9NQG7 PLK5-205ENST00000642079 1969 ntBASIC20.54■□□□□ 0.88
HPS4Q9NQG7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 AL031963.3-201ENST00000606441 850 ntBASIC20.53■□□□□ 0.88
HPS4Q9NQG7 AC004264.1-201ENST00000608354 794 ntBASIC20.53■□□□□ 0.88
HPS4Q9NQG7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HPS4Q9NQG7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.52■□□□□ 0.88
HPS4Q9NQG7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS4Q9NQG7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS4Q9NQG7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
HPS4Q9NQG7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
HPS4Q9NQG7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS4Q9NQG7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.52■□□□□ 0.88
HPS4Q9NQG7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.52■□□□□ 0.88
HPS4Q9NQG7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HPS4Q9NQG7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HPS4Q9NQG7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HPS4Q9NQG7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HPS4Q9NQG7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
HPS4Q9NQG7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
HPS4Q9NQG7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
HPS4Q9NQG7 KRT8P20-201ENST00000423953 1409 ntBASIC20.52■□□□□ 0.87
HPS4Q9NQG7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HPS4Q9NQG7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 MMP23A-201ENST00000234610 1017 ntBASIC20.51■□□□□ 0.87
HPS4Q9NQG7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
HPS4Q9NQG7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms