Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSU72Q9NP77 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.7■□□□□ 0.74
SSU72Q9NP77 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.7■□□□□ 0.74
SSU72Q9NP77 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.7■□□□□ 0.74
SSU72Q9NP77 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.7■□□□□ 0.74
SSU72Q9NP77 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSU72Q9NP77 AC110285.6-201ENST00000617652 491 ntBASIC19.7■□□□□ 0.74
SSU72Q9NP77 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSU72Q9NP77 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
SSU72Q9NP77 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
SSU72Q9NP77 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSU72Q9NP77 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SSU72Q9NP77 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SSU72Q9NP77 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSU72Q9NP77 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
SSU72Q9NP77 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSU72Q9NP77 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SSU72Q9NP77 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSU72Q9NP77 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SSU72Q9NP77 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSU72Q9NP77 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSU72Q9NP77 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSU72Q9NP77 KRT8P20-201ENST00000423953 1409 ntBASIC19.69■□□□□ 0.74
SSU72Q9NP77 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSU72Q9NP77 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSU72Q9NP77 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSU72Q9NP77 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SSU72Q9NP77 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SSU72Q9NP77 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSU72Q9NP77 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SSU72Q9NP77 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSU72Q9NP77 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SSU72Q9NP77 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.69■□□□□ 0.74
SSU72Q9NP77 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSU72Q9NP77 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.69■□□□□ 0.74
SSU72Q9NP77 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.69■□□□□ 0.74
SSU72Q9NP77 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SSU72Q9NP77 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.69■□□□□ 0.74
SSU72Q9NP77 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
SSU72Q9NP77 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSU72Q9NP77 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.69■□□□□ 0.74
SSU72Q9NP77 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSU72Q9NP77 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSU72Q9NP77 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSU72Q9NP77 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSU72Q9NP77 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSU72Q9NP77 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSU72Q9NP77 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.68■□□□□ 0.74
SSU72Q9NP77 AC079598.2-202ENST00000546624 1451 ntBASIC19.68■□□□□ 0.74
SSU72Q9NP77 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSU72Q9NP77 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSU72Q9NP77 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSU72Q9NP77 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SSU72Q9NP77 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.68■□□□□ 0.74
SSU72Q9NP77 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.68■□□□□ 0.74
SSU72Q9NP77 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.68■□□□□ 0.74
SSU72Q9NP77 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSU72Q9NP77 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
SSU72Q9NP77 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.68■□□□□ 0.74
SSU72Q9NP77 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.68■□□□□ 0.74
SSU72Q9NP77 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSU72Q9NP77 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSU72Q9NP77 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSU72Q9NP77 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSU72Q9NP77 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SSU72Q9NP77 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SSU72Q9NP77 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSU72Q9NP77 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.68■□□□□ 0.74
SSU72Q9NP77 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SSU72Q9NP77 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSU72Q9NP77 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SSU72Q9NP77 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSU72Q9NP77 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSU72Q9NP77 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.67■□□□□ 0.74
SSU72Q9NP77 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSU72Q9NP77 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSU72Q9NP77 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSU72Q9NP77 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SSU72Q9NP77 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.67■□□□□ 0.74
SSU72Q9NP77 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSU72Q9NP77 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSU72Q9NP77 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.67■□□□□ 0.74
SSU72Q9NP77 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSU72Q9NP77 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSU72Q9NP77 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSU72Q9NP77 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SSU72Q9NP77 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSU72Q9NP77 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
SSU72Q9NP77 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.67■□□□□ 0.74
SSU72Q9NP77 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSU72Q9NP77 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SSU72Q9NP77 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.66■□□□□ 0.74
SSU72Q9NP77 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSU72Q9NP77 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSU72Q9NP77 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSU72Q9NP77 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSU72Q9NP77 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSU72Q9NP77 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
SSU72Q9NP77 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSU72Q9NP77 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms