Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBB1Q9H4B7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.13■□□□□ 0.65
TUBB1Q9H4B7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBB1Q9H4B7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBB1Q9H4B7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TUBB1Q9H4B7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TUBB1Q9H4B7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBB1Q9H4B7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBB1Q9H4B7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TUBB1Q9H4B7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBB1Q9H4B7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBB1Q9H4B7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBB1Q9H4B7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 AC010980.2-201ENST00000587099 1412 ntBASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 AC069236.1-201ENST00000604339 616 ntBASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBB1Q9H4B7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 AL032819.2-201ENST00000624543 2162 ntBASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 AC004408.2-201ENST00000623613 2777 ntBASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 PHGDH-210ENST00000641115 1638 ntBASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 KRT17P1-201ENST00000399211 1546 ntBASIC19.1■□□□□ 0.65
TUBB1Q9H4B7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB1Q9H4B7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.09■□□□□ 0.65
TUBB1Q9H4B7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.09■□□□□ 0.65
TUBB1Q9H4B7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TUBB1Q9H4B7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.09■□□□□ 0.65
TUBB1Q9H4B7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.09■□□□□ 0.65
TUBB1Q9H4B7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms